RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 BLOC1S6Q9UL45 172 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 TMCC3Q9ULS5 477 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 MYH14Q7Z406 1995 aaKnown RBP4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 KDM3BQ7LBC6 1761 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 ADAMTS7Q9UKP4 1686 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 ATP8B3O60423 1300 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 COL5A2P05997 1499 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 IGHV4-4A0A075B6R2 117 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 hCG_38984A0A1B0GV85 526 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 BLOC1S5-TXNDC5H3BN57 136 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 ARPC1BO15143 372 aaKnown RBP4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 TRMUO75648 421 aaKnown RBP4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 CPNE6O95741 557 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 HIST1H2AGP0C0S8 130 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 ANOS1P23352 680 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 CDKN1AP38936 164 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 RPL36AP83881 106 aaKnown RBP4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 CDKL1Q00532 357 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 PRKCEQ02156 737 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 ARL16Q0P5N6 197 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 NME3Q13232 169 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 TMEM132DQ14C87 1099 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 TAB1Q15750 504 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 DDI2Q5TDH0 399 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 UNC5DQ6UXZ4 953 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 RUFY3Q7L099 469 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 SLC43A2Q8N370 569 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 RNF148Q8N7C7 305 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZBTB44Q8NCP5 570 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 GOLGA5Q8TBA6 731 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 MAPK15Q8TD08 544 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 HIST1H2ACQ93077 130 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 ESAMQ96AP7 390 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 GPR137Q96N19 417 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 TSGA13Q96PP4 275 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 NEDD4LQ96PU5 975 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 COQ7Q99807 217 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 NMNAT2Q9BZQ4 307 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 TMEM231Q9H6L2 316 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF665Q9H7R5 613 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 NDUFA13Q9P0J0 144 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 ERVK-18Q9QC07 812 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 KCNG2Q9UJ96 466 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 MRTO4Q9UKD2 239 aaKnown RBP4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 PPP2R2CQ9Y2T4 447 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 DDX49Q9Y6V7 483 aaKnown RBP4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 U3KQV3 271 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 CCDC171Q6TFL3 1326 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM205AQ6ZU69 1335 aa4.18□□□□□ -1.74
HMGB3P18-201ENST00000406327 COL18A1P39060 1754 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 A0A0D9SFI3 127 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 EME2A4GXA9 379 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 BMPR1BO00238 502 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 SURF4O15260 269 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 CLDN3O15551 220 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 CIAO1O76071 339 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 NADKO95544 446 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 FGF19O95750 216 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 PDGFBP01127 241 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 HMBSP08397 361 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 TPBGLP0DKB5 382 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 ERVK-10P10266 1014 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 EZRP15311 586 aaKnown RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 GIFP27352 417 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 PSMA5P28066 241 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 HLA-FP30511 346 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 PKLRP30613 574 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 ACAA2P42765 397 aaKnown RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 TKTL1P51854 596 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 SLC26A5P58743 744 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 HERV-K104P63124 156 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 SNX1Q13596 522 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 KARSQ15046 597 aaKnown RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 RBBP5Q15291 538 aaKnown RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 RFTN2Q52LD8 501 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 EPC2Q52LR7 807 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 IL23RQ5VWK5 629 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 AFTPHQ6ULP2 937 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 ARSKQ6UWY0 536 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF771Q7L3S4 317 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 CHMP1BQ7LBR1 199 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZC3H3Q8IXZ2 948 aaKnown RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 TMEM178AQ8NBL3 297 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 CCDC197Q8NCU1 140 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM71CQ8NEG0 241 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR6S1Q8NH40 331 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 C8orf46Q8TAG6 207 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 DQX1Q8TE96 717 aaKnown RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 WBP2Q969T9 261 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 RAB39BQ96DA2 213 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 CTAGE1Q96RT6 745 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 ASCL2Q99929 193 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 AGPAT1Q99943 283 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 FUCA2Q9BTY2 467 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 MTHFD2LQ9H903 347 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 LIN28AQ9H9Z2 209 aaKnown RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 C3orf14Q9HBI5 128 aa4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 UBE2TQ9NPD8 197 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P18-201ENST00000406327 DDX28Q9NUL7 540 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms