RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 CNPY1Q3B7I2 92 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 ZC3H12BQ5HYM0 836 aaKnown RBP27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 THAP5Q7Z6K1 395 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 C8orf59Q8N0T1 100 aaPredicted RBP27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 OTUB1Q96FW1 271 aaPredicted RBP27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 ZNF300Q96RE9 604 aaPredicted RBP27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 KCMF1Q9P0J7 381 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 ORC6Q9Y5N6 252 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 NR2F6P10588 404 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 CSNK2A2P19784 350 aaPredicted RBP27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 TUBA4AP68366 448 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 RUNX2Q13950 521 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 RFX4Q33E94 735 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 TMEM107Q6UX40 140 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 SHISA5Q8N114 240 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 THAP11Q96EK4 314 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 C10orf90Q96M02 699 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 THSD1Q9NS62 852 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 ZSCAN32Q9NX65 697 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 SH3GLB1Q9Y371 365 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 PCDHGB3Q9Y5G1 929 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 LYVE1Q9Y5Y7 322 aa27.32■■□□□ 1.96
CSNK1E-205ENST00000405675 OR5K3A6NET4 321 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 TRIM64CA6NLI5 447 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 J3KTA2 159 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 EIF2S1P05198 315 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 TDGF1P13385 188 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 PRKAG1P54619 331 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 MAZP56270 477 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 NXPH1P58417 271 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 IL1RL1Q01638 556 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 SRSF5Q13243 272 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 RBM44Q6ZP01 1051 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 ARMC8Q8IUR7 673 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 PIK3C3Q8NEB9 887 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 GEMIN6Q8WXD5 167 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 PRMT8Q9NR22 394 aaPredicted RBP27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 CCDC163A0A0D9SF12 145 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 CD247P20963 164 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 ALDH3B2P48448 385 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 SUZ12Q15022 739 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 CEBPEQ15744 281 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 SYPL1Q16563 259 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 FAHD1Q6P587 224 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 TMEM64Q6YI46 380 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 CAMKVQ8NCB2 501 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 OR9A2Q8NGT5 310 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 TMIGD2Q96BF3 282 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 YIPF4Q9BSR8 244 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 RIBC2Q9H4K1 309 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 SEMA3GQ9NS98 782 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 TRPC4Q9UBN4 977 aa27.31■■□□□ 1.96
CSNK1E-205ENST00000405675 TECTAO75443 2155 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 SLC16A6O15403 523 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 B4GAT1O43505 415 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 BMP10O95393 424 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 ITGAMP11215 1152 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 MATN1P21941 496 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 FUT4P22083 530 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 OLR1P78380 273 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 CTU2Q2VPK5 515 aaKnown RBP27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 RNF44Q7L0R7 432 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 OLIG3Q7RTU3 272 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 SERINC2Q96SA4 455 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 CSF3RQ99062 836 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 ING2Q9H160 280 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 ANKRA2Q9H9E1 313 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 EXD2Q9NVH0 621 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 ZNF451Q9Y4E5 1061 aa27.3■■□□□ 1.96
CSNK1E-205ENST00000405675 A0A087WXM4 84 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 LAMTOR5O43504 91 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 HCRTR1O43613 425 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 SLC28A2O43868 658 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 MFN2O95140 757 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 CYP4B1P13584 511 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 IL7RP16871 459 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 TNFRSF17Q02223 184 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 RELAQ04206 551 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 WDR45BQ5MNZ6 344 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 GPR32P1Q8NGA4 272 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 OR4C15Q8NGM1 316 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 SFXN5Q8TD22 340 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 LMX1AQ8TE12 382 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 XAGE5Q8WWM1 108 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 RBM38Q9H0Z9 239 aaKnown RBP27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 NDUFA13Q9P0J0 144 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 ZNF860A6NHJ4 632 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 TNFRSF11BO00300 401 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 VILLO15195 856 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 BCAT2O15382 392 aaPredicted RBP27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 CPN2P22792 545 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 RXRGP48443 463 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 LIM2P55344 173 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 PUM1Q14671 1186 aaKnown RBP eCLIP27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 LTB4RQ15722 352 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 MEP1AQ16819 746 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 PRSS41Q7RTY9 318 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 OOSP2Q86WS3 158 aa27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 APOBEC4Q8WW27 367 aaKnown RBP27.29■■□□□ 1.96
CSNK1E-205ENST00000405675 RERGQ96A58 199 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms