RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 IL23RQ5VWK5 629 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 FAM219BQ5XKK7 198 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 CPZQ66K79 652 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 FAAH2Q6GMR7 532 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 TMEM205Q6UW68 189 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 R3HCC1LQ7Z5L2 792 aaKnown RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 SPATA19Q7Z5L4 167 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 MRGPREQ86SM8 312 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 APLFQ8IW19 511 aaPredicted RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 SLC34A3Q8N130 599 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 CLEC1AQ8NC01 280 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 OR4K14Q8NGD5 310 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 CEP70Q8NHQ1 597 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 ACTRT2Q8TDY3 377 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 RBM18Q96H35 190 aaKnown RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 FCRL1Q96LA6 429 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 CSF3RQ99062 836 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 PRPF18Q99633 342 aaKnown RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 SLC25A23Q9BV35 468 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 NSRP1Q9H0G5 558 aaKnown RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 TEX10Q9NXF1 929 aaPredicted RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 ASIC5Q9NY37 505 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 EHD3Q9NZN3 535 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
RPAIN-204ENST00000405578 ENTPD4Q9Y227 616 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 PCDHA9Q9Y5H5 950 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 PCM1Q15154 2024 aa9.88□□□□□ -0.83
RPAIN-204ENST00000405578 SVILO95425 2214 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 MTORP42345 2549 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 GOLGA8QA0A0J9YX86 632 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 TCRBV16S1A1N1A0A5B0 115 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 GOLGA8OA6NCC3 632 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 GLOD5A6NK44 160 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 GOLGA8NF8WBI6 632 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 SDHDO14521 159 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 SDC1P18827 310 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 TNNI3P19429 210 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 DDCP20711 480 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 PRPS1L1P21108 318 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 MAOAP21397 527 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 BTG2P78543 158 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 FOLH1Q04609 750 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 CHAF1BQ13112 559 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 ELAVL1Q15717 326 aaKnown RBP9.87□□□□□ -0.83
RPAIN-204ENST00000405578 VWA5B1Q5TIE3 1220 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 FAM69BQ5VUD6 431 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 C18orf63Q68DL7 685 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 OGFOD2Q6N063 350 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 SLC48A1Q6P1K1 146 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 EPGNQ6UW88 154 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 LARP4Q71RC2 724 aaKnown RBP eCLIP9.87□□□□□ -0.83
RPAIN-204ENST00000405578 NDUFAF7Q7L592 441 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 CPEB2Q7Z5Q1 589 aaKnown RBP9.87□□□□□ -0.83
RPAIN-204ENST00000405578 PPP1R32Q7Z5V6 425 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 ANKRD37Q7Z713 158 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 CLNKQ7Z7G1 428 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 SCUBE1Q8IWY4 988 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 LIX1Q8N485 282 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 TMEM102Q8N9M5 508 aaPredicted RBP9.87□□□□□ -0.83
RPAIN-204ENST00000405578 Q8NA96 180 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 DAZLQ92904 295 aaKnown RBP9.87□□□□□ -0.83
RPAIN-204ENST00000405578 TSLPQ969D9 159 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 KLHL29Q96CT2 875 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 MTERF3Q96E29 417 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 CHMP6Q96FZ7 201 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 RILPQ96NA2 401 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 DGAT2Q96PD7 388 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 TSSK3Q96PN8 268 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 LPAR4Q99677 370 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 TUBB6Q9BUF5 446 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 C1orf50Q9BV19 199 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 ALOXE3Q9BYJ1 711 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 WDR55Q9H6Y2 383 aaPredicted RBP9.87□□□□□ -0.83
RPAIN-204ENST00000405578 NPHS2Q9NP85 383 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 ADAP2Q9NPF8 381 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 SLAMF7Q9NQ25 335 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 TCF7L2Q9NQB0 619 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 PNO1Q9NRX1 252 aaKnown RBP9.87□□□□□ -0.83
RPAIN-204ENST00000405578 FGFR1OP2Q9NVK5 253 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 P4HTMQ9NXG6 502 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 UTS2RQ9UKP6 389 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 TRIM33Q9UPN9 1127 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 HS3ST3B1Q9Y662 390 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 CLCA3PQ9Y6N3 262 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 MDC1Q14676 2089 aaKnown RBP9.87□□□□□ -0.83
RPAIN-204ENST00000405578 ZFHX3Q15911 3703 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 PCNX1Q96RV3 2341 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 CCDC168Q8NDH2 2452 aa9.87□□□□□ -0.83
RPAIN-204ENST00000405578 SNRNP200O75643 2136 aaKnown RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 HEATR5BQ9P2D3 2071 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 NAV3Q8IVL0 2385 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 LOC102723996A0A087X1L8 192 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 IGKV3D-11A0A0A0MRZ8 115 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 A0A0G2JND7 137 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 OR2W5A6NFC9 320 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 PGRMC2O15173 223 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 UBDO15205 165 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 FGF17O60258 216 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 KLHL41O60662 606 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 LDB3O75112 727 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms