RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 NKX2-6A6NCS4 301 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 TMEM114B3SHH9 223 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 FOXE1O00358 373 aaPredicted RBP16.68■□□□□ 0.26
HDAC11-204ENST00000404040 TSPAN8P19075 237 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 JAK1P23458 1154 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 MSX1P28360 303 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 HMOX2P30519 316 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 RFC3P40938 356 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 PPP2R2AP63151 447 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 MPP2Q14168 576 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 TMEM35AQ53FP2 167 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 FRG2Q64ET8 278 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 LETMD1Q6P1Q0 360 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 CHSY3Q70JA7 882 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 RPS27LQ71UM5 84 aaKnown RBP16.68■□□□□ 0.26
HDAC11-204ENST00000404040 DMRTC2Q8IXT2 367 aaPredicted RBP16.68■□□□□ 0.26
HDAC11-204ENST00000404040 ARMC10Q8N2F6 343 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 LILRB4Q8NHJ6 448 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 WDR20Q8TBZ3 569 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 FRG2BQ96QU4 278 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 SLC6A16Q9GZN6 736 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 CLK4Q9HAZ1 481 aaKnown RBP16.68■□□□□ 0.26
HDAC11-204ENST00000404040 NMRK1Q9NWW6 199 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 RNF6Q9Y252 685 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 HRH3Q9Y5N1 445 aa16.68■□□□□ 0.26
HDAC11-204ENST00000404040 SAGE2PA6NJ88 616 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 GALR3O60755 368 aaPredicted RBP16.67■□□□□ 0.26
HDAC11-204ENST00000404040 TOXO94900 526 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 OR4F21O95013 312 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 PTX3P26022 381 aaPredicted RBP16.67■□□□□ 0.26
HDAC11-204ENST00000404040 ARFIP1P53367 373 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 CHI3L2Q15782 390 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 ATG16L1Q676U5 607 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 TMEM211Q6ICI0 200 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 TRIM40Q6P9F5 258 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 TMEM200AQ86VY9 491 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 SULF2Q8IWU5 870 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 ARFGAP2Q8N6H7 521 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 CDYL2Q8N8U2 506 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 HUS1BQ8NHY5 278 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 METTL6Q8TCB7 284 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 MGARPQ8TDB4 240 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 ZNF473Q8WTR7 871 aaKnown RBP16.67■□□□□ 0.26
HDAC11-204ENST00000404040 GAL3ST3Q96A11 431 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 FAR2Q96K12 515 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 ROGDIQ9GZN7 287 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 REXO4Q9GZR2 422 aaKnown RBP16.67■□□□□ 0.26
HDAC11-204ENST00000404040 TP63Q9H3D4 680 aaPredicted RBP16.67■□□□□ 0.26
HDAC11-204ENST00000404040 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 KCNN3Q9UGI6 736 aa16.67■□□□□ 0.26
HDAC11-204ENST00000404040 WDR91A4D1P6 747 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 LRIT2A6NDA9 550 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 FCHO1O14526 889 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 HS6ST1O60243 411 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 CDC40O60508 579 aaKnown RBP eCLIP16.66■□□□□ 0.26
HDAC11-204ENST00000404040 PRMT3O60678 531 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 ULK1O75385 1050 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 NADKO95544 446 aaPredicted RBP16.66■□□□□ 0.26
HDAC11-204ENST00000404040 CHEK2O96017 543 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 HSD3B1P14060 373 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 ALOX12P18054 663 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 HSD3B2P26439 372 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 WDR4P57081 412 aaKnown RBP16.66■□□□□ 0.26
HDAC11-204ENST00000404040 OLR1P78380 273 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 ADPRMQ3LIE5 342 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 DEFB134Q4QY38 66 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 TOR1AIP1Q5JTV8 583 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 QSOX2Q6ZRP7 698 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 ZFP62Q8NB50 900 aaPredicted RBP16.66■□□□□ 0.26
HDAC11-204ENST00000404040 OR6Y1Q8NGX8 325 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 C16orf52Q8NHV5 167 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 SELENOMQ8WWX9 145 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 RND1Q92730 232 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 SERPINI1Q99574 410 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 ZNF559Q9BR84 538 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 UCK2Q9BZX2 261 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 BRF2Q9HAW0 419 aa16.66■□□□□ 0.26
HDAC11-204ENST00000404040 IGKV3D-11A0A0A0MRZ8 115 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 KLRC4-KLRK1H3BQV0 150 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 PPP6CO00743 305 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 CHST10O43529 356 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 PEX1O43933 1283 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 B4GALT2O60909 372 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 DNAJB6O75190 326 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 UROSP10746 265 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 DNAJA1P31689 397 aaKnown RBP16.65■□□□□ 0.26
HDAC11-204ENST00000404040 STX3Q13277 289 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 CUL3Q13618 768 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 DDX39BQ13838 428 aaKnown RBP16.65■□□□□ 0.26
HDAC11-204ENST00000404040 ARL13AQ5H913 290 aaPredicted RBP16.65■□□□□ 0.26
HDAC11-204ENST00000404040 ARHGAP11AQ6P4F7 1023 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 ZCCHC23Q6ZST2 131 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 RPRMLQ8N4K4 120 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 GBP7Q8N8V2 638 aaPredicted RBP16.65■□□□□ 0.26
HDAC11-204ENST00000404040 NFAM1Q8NET5 270 aaPredicted RBP16.65■□□□□ 0.26
HDAC11-204ENST00000404040 OR2L5Q8NG80 312 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 UTP15Q8TED0 518 aaKnown RBP16.65■□□□□ 0.26
HDAC11-204ENST00000404040 DYDC1Q8WWB3 177 aa16.65■□□□□ 0.26
HDAC11-204ENST00000404040 MS4A6EQ96DS6 147 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms