RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SOCS6O14544 535 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 PGRP06401 933 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 MPIP34949 423 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 NCBP2P52298 156 aaKnown RBP eCLIP31.13■■■□□ 2.574e-8■■□□□ 13.3
CSNK1E-204ENST00000403904 WNT3P56703 355 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 BLOC1S3Q6QNY0 202 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 GK5Q6ZS86 529 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 SPACA3Q8IXA5 215 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 DOK4Q8TEW6 326 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 MYLK2Q9H1R3 596 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 GLIPR2Q9H4G4 154 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 NR5A2O00482 541 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 RRP8O43159 456 aaKnown RBP31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 EFSO43281 561 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 IL6P05231 212 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 RCAN2Q14206 197 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 ADAMTS17Q8TE56 1095 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 VPS33AQ96AX1 596 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 AMDHD1Q96NU7 426 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 ADAP2Q9NPF8 381 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 TMEM45AQ9NWC5 275 aa31.13■■■□□ 2.57
CSNK1E-204ENST00000403904 LOC102723996A0A087X1L8 192 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 PCDH17O14917 1159 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 NKX2-8O15522 239 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 TNNI3P19429 210 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 FRKP42685 505 aaPredicted RBP31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 KCNK10P57789 538 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 LTB4RQ15722 352 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 TIGD2Q4W5G0 525 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 ATP1A1-AS1Q5TC04 95 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 CPZQ66K79 652 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 ZNF551Q7Z340 670 aaPredicted RBP31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 RAB43Q86YS6 212 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 C7orf57Q8NEG2 295 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 ADCY4Q8NFM4 1077 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 NACC2Q96BF6 587 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 ZBED6CLQ96FA7 236 aaPredicted RBP31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 OR52E6Q96RD3 313 aa31.12■■■□□ 2.57
CSNK1E-204ENST00000403904 NUP214P35658 2090 aaPredicted RBP31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 A0A1W2PRB8 838 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 DCTN3O75935 186 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 ATP1B1P05026 303 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 NT5EP21589 574 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 MANFP55145 182 aaKnown RBP31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 ELAVL1Q15717 326 aaKnown RBP31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 ANKRD46Q86W74 232 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 NATD1Q8N6N6 113 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 OR11G2Q8NGC1 345 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 OR9A2Q8NGT5 310 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 PTPMT1Q8WUK0 201 aaPredicted RBP31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 WDR77Q9BQA1 342 aaPredicted RBP31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 PELOQ9BRX2 385 aaKnown RBP31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 CCDC106Q9BWC9 280 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 SSUH2Q9Y2M2 353 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 CAPN7Q9Y6W3 813 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 PCSK5Q92824 1860 aa31.11■■■□□ 2.57
CSNK1E-204ENST00000403904 SYNDIG1LA6NDD5 238 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 SCN2BO60939 215 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 SEC24DO94855 1032 aaPredicted RBP31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 VPS26BQ4G0F5 336 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 MRGPREQ86SM8 312 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 AMER2Q8N7J2 671 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 RIT1Q92963 219 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 SPDL1Q96EA4 605 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 LRRC37BQ96QE4 947 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 ACSS1Q9NUB1 689 aaPredicted RBP31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 CLCA3PQ9Y6N3 262 aa31.1■■■□□ 2.57
CSNK1E-204ENST00000403904 CDC14CA4D256 554 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 C17orf105B2RV13 164 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 TAF4O00268 1085 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 PRKAR1AP10644 381 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 COX6A1P12074 109 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 ADSLP30566 484 aaPredicted RBP31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 HSPB3Q12988 150 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 PCOLCEQ15113 449 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 PAPD4Q6PIY7 484 aaKnown RBP31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 PROSER1Q86XN7 944 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 CLECL1Q8IZS7 167 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 ZCCHC14Q8WYQ9 949 aaKnown RBP31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 SLC52A3Q9NQ40 469 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 P4HTMQ9NXG6 502 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 IGHV1-45A0A0A0MS14 117 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 CCDC154A6NI56 674 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 CAPN3P20807 821 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 PGDP52209 483 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 ANXA8L1Q5VT79 327 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 LPAR4Q99677 370 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 ZNF700Q9H0M5 742 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 CXorf21Q9HAI6 301 aa31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 FAM120CQ9NX05 1096 aaKnown RBP31.09■■■□□ 2.57
CSNK1E-204ENST00000403904 PRSS51A0A1B0GVH4 220 aa31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 RNASET2O00584 256 aaKnown RBP31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 C6orf47O95873 294 aa31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 CT62P0C5K7 136 aa31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 ATP1A4Q13733 1029 aa31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 PRICKLE4Q2TBC4 344 aa31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 VPS37AQ8NEZ2 397 aa31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 ZFP28Q8NHY6 868 aa31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 LOC400499M0QZD8 3231 aa31.08■■■□□ 2.57
CSNK1E-204ENST00000403904 ZNF891A8MT65 544 aaPredicted RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms