RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CYP7B1O75881 506 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 MFN2O95140 757 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 PDHA2P29803 388 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 MLLT11Q13015 90 aaPredicted RBP18.82■□□□□ 0.6
CCDC47-202ENST00000403162 COL19A1Q14993 1142 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 ZNF284Q2VY69 593 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 HIST2H2AA3Q6FI13 130 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 ASTLQ6HA08 431 aaPredicted RBP18.82■□□□□ 0.6
CCDC47-202ENST00000403162 GLYATL1Q969I3 302 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 TRMT61AQ96FX7 289 aaKnown RBP18.82■□□□□ 0.6
CCDC47-202ENST00000403162 LRRC3BQ96PB8 259 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 SGPP1Q9BX95 441 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 LINC00597Q9H2U6 94 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 SNTG1Q9NSN8 517 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 DDX28Q9NUL7 540 aaKnown RBP18.82■□□□□ 0.6
CCDC47-202ENST00000403162 TBC1D14Q9P2M4 693 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 HOXC11O43248 304 aaPredicted RBP18.82■□□□□ 0.6
CCDC47-202ENST00000403162 HBQ1P09105 142 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 ZNF91Q05481 1191 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 MFSD4BQ5TF39 518 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 Q7L0L9 218 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 SLC6A18Q96N87 628 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 PHOX2BQ99453 314 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 NLNQ9BYT8 704 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 A4GALTQ9NPC4 353 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 SSR3Q9UNL2 185 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 SNX11Q9Y5W9 270 aa18.82■□□□□ 0.6
CCDC47-202ENST00000403162 ANKRD34BA5PLL1 514 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 HMX3A6NHT5 357 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 FAAHO00519 579 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 LGI1O95970 557 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 KLK1P06870 262 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 IL3P08700 152 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 ELAVL4P26378 380 aaKnown RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 FEN1P39748 380 aaKnown RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 DGKEP52429 567 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 LARS2Q15031 903 aaKnown RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 SEC23BQ15437 767 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 CCDC85BQ15834 202 aaPredicted RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 OCLNQ16625 522 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 CASP12Q6UXS9 341 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 GATAD2AQ86YP4 633 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 ASCC1Q8N9N2 400 aaKnown RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 OR8J1Q8NGP2 316 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 OR9Q1Q8NGQ5 310 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 MYLIPQ8WY64 445 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 MYADMQ96S97 322 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 SLC6A16Q9GZN6 736 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 CXorf36Q9H7Y0 433 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 TAAR2Q9P1P5 351 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 NUP210Q8TEM1 1887 aaPredicted RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 A0A1W2PQ09 198 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 MEIOCA2RUB1 952 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 CENPXA8MT69 81 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 SCO2O43819 266 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 CYP17A1P05093 508 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 XKP51811 444 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 SCN1BQ07699 218 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 TMEM115Q12893 351 aaPredicted RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 FOXD4Q12950 439 aaPredicted RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 ASAH1Q13510 395 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 CDK10Q15131 360 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 GLYR1Q49A26 553 aaPredicted RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 ZNF658BQ4V348 819 aaPredicted RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 DCST1Q5T197 706 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 IER5LQ5T953 404 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 CEACAM20Q6UY09 585 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 TMEM25Q86YD3 366 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 SMRP1Q8NCR6 262 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 GPR32P1Q8NGA4 272 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 SLC25A46Q96AG3 418 aa18.81■□□□□ 0.6
CCDC47-202ENST00000403162 POLR2J2Q9GZM3 115 aaKnown RBP18.81■□□□□ 0.6
CCDC47-202ENST00000403162 TSPAN11A1L157 253 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 CACNB4O00305 520 aaPredicted RBP18.8■□□□□ 0.6
CCDC47-202ENST00000403162 SLC9A3R1O14745 358 aaPredicted RBP18.8■□□□□ 0.6
CCDC47-202ENST00000403162 SOX14O95416 240 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 IL1AP01583 271 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 RECQLP46063 649 aaPredicted RBP18.8■□□□□ 0.6
CCDC47-202ENST00000403162 MRPS15P82914 257 aaKnown RBP18.8■□□□□ 0.6
CCDC47-202ENST00000403162 C1DQ13901 141 aaKnown RBP18.8■□□□□ 0.6
CCDC47-202ENST00000403162 RPS26P11Q5JNZ5 115 aaPredicted RBP18.8■□□□□ 0.6
CCDC47-202ENST00000403162 SAXO2Q658L1 398 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 ERAP2Q6P179 960 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 TECPR1Q7Z6L1 1165 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 PHC2Q8IXK0 858 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 NEURL3Q96EH8 262 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 TSSK6Q9BXA6 273 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 MARCH7Q9H992 704 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 MIEF1Q9NQG6 463 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 CD207Q9UJ71 328 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 MYOFQ9NZM1 2061 aa18.8■□□□□ 0.6
CCDC47-202ENST00000403162 HEPACAM2A8MVW5 462 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 C5orf58C9J3I9 102 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 SEMA7AO75326 666 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 TIMP2P16035 220 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 DDX5P17844 614 aaKnown RBP18.79■□□□□ 0.6
CCDC47-202ENST00000403162 CXCR2P25025 360 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 DGKGP49619 791 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 HYAL2Q12891 473 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 TCTN3Q6NUS6 607 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms