RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 IRAK4Q9NWZ3 460 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 U3KQA8 63 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 PCDH15Q96QU1 1955 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 MN1Q10571 1320 aaPredicted RBP12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 CPED1A4D0V7 1026 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 SAC3D1A6NKF1 404 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 H0YJX3 145 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 M0QX08 132 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 HMGN4O00479 90 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 PRSS23O95084 383 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 GPR75O95800 540 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 FHP07954 510 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 RPSAP08865 295 aaKnown RBP12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 TFPTP0C1Z6 253 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 PORP16435 677 aaPredicted RBP12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 MATN1P21941 496 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 CRYBA2P53672 197 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 PRR5P85299 388 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 SHC2P98077 582 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 KCNAB1Q14722 419 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 MYBPC3Q14896 1274 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 GPR19Q15760 415 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 INAVAQ3KP66 663 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 CYBRD1Q53TN4 286 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 SNAP47Q5SQN1 464 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 SZRD1Q7Z422 152 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 EID2Q8N6I1 236 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 OR56A1Q8NGH5 318 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 RAB8BQ92930 207 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 COL26A1Q96A83 441 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 SLC35G5Q96KT7 338 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 BTBD9Q96Q07 612 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 C9orf16Q9BUW7 83 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 SERHL2Q9H4I8 314 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 CLK4Q9HAZ1 481 aaKnown RBP12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 NTN4Q9HB63 628 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 A4GALTQ9NPC4 353 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 ADPRHL2Q9NX46 363 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 THUMPD1Q9NXG2 353 aaKnown RBP12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 DNAJB9Q9UBS3 223 aa12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 TNRC6BQ9UPQ9 1833 aaKnown RBP12.51□□□□□ -0.41
CEACAM1-206ENST00000403136 ASXL3Q9C0F0 2248 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 EME2A4GXA9 379 aaPredicted RBP12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 ACOX3O15254 700 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 SUV39H1O43463 412 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 NSA2O95478 260 aaKnown RBP12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 CER1O95813 267 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 CST1P01037 141 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 OR12D1P0DN82 309 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 CPMP14384 443 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 EMP3P54852 163 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 PCBP3P57721 371 aaKnown RBP12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 SELENOWP63302 87 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 FOLH1Q04609 750 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 ELOAQ14241 798 aaKnown RBP12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 GRM7Q14831 915 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 ANGPT1Q15389 498 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 LTB4RQ15722 352 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 CRB2Q5IJ48 1285 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 TMTC4Q5T4D3 741 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 REEP3Q6NUK4 255 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 GUSBP11Q6P575 273 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 TMEM71Q6P5X7 295 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 FKBP9P1Q75LS8 142 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 PRSS42Q7Z5A4 293 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 KMT5CQ86Y97 462 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 D2HGDHQ8N465 521 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 NUP43Q8NFH3 380 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 OR2I1PQ8NGU4 316 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 SLC38A5Q8WUX1 472 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 KAT2AQ92830 837 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 SLC41A2Q96JW4 573 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 NUDT22Q9BRQ3 303 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 OR51I1Q9H343 314 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 IL1RAPQ9NPH3 570 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 ENAMQ9NRM1 1142 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 OAZ3Q9UMX2 235 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 ANGPT4Q9Y264 503 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 LRCH1Q9Y2L9 728 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 AK5Q9Y6K8 562 aa12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 TP53BP1Q12888 1972 aaPredicted RBP12.5□□□□□ -0.41
CEACAM1-206ENST00000403136 A8MU76 341 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 TMEM229AB2RXF0 380 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 H3BMH7 237 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 UPK1AO00322 258 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 PLOD2O00469 737 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 FGF17O60258 216 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 LDB3O75112 727 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 IFNA14P01570 189 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 SEMG1P04279 462 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 HMGN2P05204 90 aaKnown RBP12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 SYPP08247 313 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 RNH1P13489 461 aaKnown RBP12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 UQCRBP14927 111 aa12.49□□□□□ -0.41
CEACAM1-206ENST00000403136 MC3RP41968 323 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms