RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 FAM20CQ8IXL6 584 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 RASGEF1AQ8N9B8 481 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 ZNF461Q8TAF7 563 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 SLC7A13Q8TCU3 470 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 ZNF480Q8WV37 535 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 POF1BQ8WVV4 589 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 KLK6Q92876 244 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 RNFT2Q96EX2 444 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 TMEM169Q96HH4 297 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 TTLL2Q9BWV7 592 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 CDCA4Q9BXL8 241 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 NXF2Q9GZY0 626 aaKnown RBP8.72□□□□□ -1.01
HPS4-203ENST00000402105 SPATA6Q9NWH7 488 aaPredicted RBP8.72□□□□□ -1.01
HPS4-203ENST00000402105 STMN3Q9NZ72 180 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 PTGFRNQ9P2B2 879 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 SLC25A13Q9UJS0 675 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 MAPRE3Q9UPY8 281 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 SPEF1Q9Y4P9 236 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 A3GALT2U3KPV4 340 aa8.72□□□□□ -1.01
HPS4-203ENST00000402105 TDRD15B5MCY1 1934 aaKnown RBP8.71□□□□□ -1.01
HPS4-203ENST00000402105 USP34Q70CQ2 3546 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 ZNF670-ZNF695F2Z2N8 137 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 RNASET2O00584 256 aaKnown RBP8.71□□□□□ -1.01
HPS4-203ENST00000402105 HRO43593 1189 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 MPZL2O60487 215 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 PDE9AO76083 593 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 HLA-FP30511 346 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 TMEM115Q12893 351 aaPredicted RBP8.71□□□□□ -1.01
HPS4-203ENST00000402105 CDKN3Q16667 212 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 ZNF630Q2M218 657 aaPredicted RBP8.71□□□□□ -1.01
HPS4-203ENST00000402105 GGTA1PQ4G0N0 100 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 GRHL2Q6ISB3 625 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 UNC5DQ6UXZ4 953 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 TMEM25Q86YD3 366 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 REM2Q8IYK8 340 aaPredicted RBP8.71□□□□□ -1.01
HPS4-203ENST00000402105 OR4F15Q8NGB8 312 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 GRPEL2Q8TAA5 225 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 TBC1D20Q96BZ9 403 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 TRMT61BQ9BVS5 477 aaKnown RBP8.71□□□□□ -1.01
HPS4-203ENST00000402105 MIXL1Q9H2W2 232 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 C3orf14Q9HBI5 128 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 CAPN10Q9HC96 672 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 MRPL17Q9NRX2 175 aaKnown RBP8.71□□□□□ -1.01
HPS4-203ENST00000402105 OR51B4Q9Y5P0 310 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 LOC285556D6RIA3 1793 aa8.71□□□□□ -1.01
HPS4-203ENST00000402105 FAM183AA6NL82 134 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 GPR37L1O60883 481 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 ATG13O75143 517 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 LEFTY1O75610 366 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 DDX5P17844 614 aaKnown RBP8.71□□□□□ -1.02
HPS4-203ENST00000402105 RPS7P62081 194 aaKnown RBP8.71□□□□□ -1.02
HPS4-203ENST00000402105 FKBP1BP68106 108 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 FAPQ12884 760 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 EFR3AQ14156 821 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 GRIN2CQ14957 1233 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 MZT2BQ6NZ67 158 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 PODNL1Q6PEZ8 512 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 BEST4Q8NFU0 473 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 CREB3L4Q8TEY5 395 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 CHTF18Q8WVB6 975 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 ALG14Q96F25 216 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 ENOPH1Q9UHY7 261 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 KNL1Q8NG31 2342 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 A0A0B4J293 547 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 SH3D21A4FU49 640 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 HEPACAM2A8MVW5 462 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 TMEM189-UBE2V1I3L0A0 370 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 GFYI3L273 518 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 SYPP08247 313 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 FURINP09958 794 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 MAPK8P45983 427 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 MVDP53602 400 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 MPPE1Q53F39 396 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 PLEKHS1Q5SXH7 462 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 TCTN3Q6NUS6 607 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 GDPD4Q6W3E5 623 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 MSANTD1Q6ZTZ1 278 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 C6orf120Q7Z4R8 191 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 TECPR1Q7Z6L1 1165 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 CHCHD4Q8N4Q1 142 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 OR4K5Q8NGD3 323 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 OR52I1Q8NGK6 324 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 OR8J1Q8NGP2 316 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 TM9SF4Q92544 642 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 RNF31Q96EP0 1072 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 ZFP3Q96NJ6 502 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 FCRL4Q96PJ5 515 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 RAD9AQ99638 391 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 CXXC1Q9P0U4 656 aaPredicted RBP8.71□□□□□ -1.02
HPS4-203ENST00000402105 FTSJ1Q9UET6 329 aa8.71□□□□□ -1.02
HPS4-203ENST00000402105 CPSF4LA6NMK7 179 aaKnown RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 EIF3FO00303 357 aaPredicted RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 PLA2G10O15496 165 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 SOCS5O75159 536 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 POP4O95707 220 aaKnown RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 ELFN1P0C7U0 828 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 ELAVL4P26378 380 aaKnown RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 SSTR2P30874 369 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 RFX3P48380 749 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 FCHO2Q0JRZ9 810 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms