RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 BAIAP2Q9UQB8 552 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 CCNOP22674 350 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 TMBIM6P55061 237 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 PAGE3Q5JUK9 113 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 TMEM225Q6GV28 225 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 FIGLAQ6QHK4 219 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 MYRFLQ96LU7 910 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 FEVQ99581 238 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 LDAHQ9H6V9 325 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 TRPV4Q9HBA0 871 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 MEMO1Q9Y316 297 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 MAN2B1O00754 1011 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 ARSAP15289 507 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 NAA10P41227 235 aaPredicted RBP17.36■□□□□ 0.37
COL18A1-204ENST00000400337 ENTPD1P49961 510 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 WDR5P61964 334 aaKnown RBP17.36■□□□□ 0.37
COL18A1-204ENST00000400337 ZNF761Q86XN6 746 aaPredicted RBP17.36■□□□□ 0.37
COL18A1-204ENST00000400337 OR52N2Q8NGI0 321 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 DAZLQ92904 295 aaKnown RBP17.36■□□□□ 0.37
COL18A1-204ENST00000400337 TMEM125Q96AQ2 219 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 ECHDC3Q96DC8 303 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 S100A16Q96FQ6 103 aaKnown RBP17.36■□□□□ 0.37
COL18A1-204ENST00000400337 CLSTN3Q9BQT9 956 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 TREX1Q9NSU2 369 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 TMEM184CQ9NVA4 438 aa17.36■□□□□ 0.37
COL18A1-204ENST00000400337 PENKP01210 267 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-204ENST00000400337 KCNJ5P48544 419 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 CLCN2P51788 898 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 GRIN2CQ14957 1233 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 NDUFAF5Q5TEU4 345 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 FOXJ1Q92949 421 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 ENAMQ9NRM1 1142 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 MED11Q9P086 117 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 PLCL2Q9UPR0 1127 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 ZFR2Q9UPR6 939 aaKnown RBP17.35■□□□□ 0.37
COL18A1-204ENST00000400337 LOC100509620A0A075B734 347 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 A0A1W2PPL8 197 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 SEMA4FO95754 770 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 PRH1P02810 166 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 STSP08842 583 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 CEBPBP17676 345 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 IST1P53990 364 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 SHC2P98077 582 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 HHEXQ03014 270 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 TRNP1Q6NT89 227 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 TTLL10Q6ZVT0 673 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 HSD11B1LQ7Z5J1 315 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 OR7G3Q8NG95 312 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 DHRS1Q96LJ7 313 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 RNF38Q9H0F5 515 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 NPC1O15118 1278 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 SORBS2O94875 1100 aaKnown RBP17.35■□□□□ 0.37
COL18A1-204ENST00000400337 HOXD8P13378 290 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-204ENST00000400337 PRDX3P30048 256 aaKnown RBP17.35■□□□□ 0.37
COL18A1-204ENST00000400337 CRYZQ08257 329 aaKnown RBP17.35■□□□□ 0.37
COL18A1-204ENST00000400337 NECTIN4Q96NY8 510 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 SMIM14Q96QK8 99 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 ZNF140P52738 457 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-204ENST00000400337 HK3P52790 923 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 MS4A2Q01362 244 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 CLCA4Q14CN2 919 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 SEC23BQ15437 767 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 NEIL3Q8TAT5 605 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 DHRS4Q9BTZ2 278 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 DEFB126Q9BYW3 111 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 C8orf33Q9H7E9 229 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-204ENST00000400337 ZDHHC7Q9NXF8 308 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 PCDHGB2Q9Y5G2 931 aa17.35■□□□□ 0.37
COL18A1-204ENST00000400337 ATF6P18850 670 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 MSANTD1Q6ZTZ1 278 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 UBE2Q1Q7Z7E8 422 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 NETO1Q8TDF5 533 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 PEX11GQ96HA9 241 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 SLC46A2Q9BY10 475 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 GPR39O43194 453 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 MAD2L1BPQ15013 274 aaPredicted RBP17.34■□□□□ 0.37
COL18A1-204ENST00000400337 LRR1Q96L50 414 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 DKK3Q9UBP4 350 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 DLGAP1O14490 977 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 THEGLP0DJG4 465 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 TNFRSF1BP20333 461 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 GPR4P46093 362 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 PRKCDQ05655 676 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 RPA4Q13156 261 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 GAS6Q14393 721 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 PAQR9Q6ZVX9 377 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 TMED4Q7Z7H5 227 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 MMP27Q9H306 513 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 AHDC1Q5TGY3 1603 aaPredicted RBP17.34■□□□□ 0.37
COL18A1-204ENST00000400337 ADAM12O43184 909 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 APBB3O95704 486 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 VAMP1P23763 118 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 CLRN1P58418 232 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 PLEKHG7Q6ZR37 379 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 CCDC115Q96NT0 180 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 R3HDMLQ9H3Y0 253 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 SPATA6Q9NWH7 488 aaPredicted RBP17.34■□□□□ 0.37
COL18A1-204ENST00000400337 TAS2R10Q9NYW0 307 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 ST14Q9Y5Y6 855 aa17.34■□□□□ 0.37
COL18A1-204ENST00000400337 TEX46H3BTG2 121 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms