RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ATN1P54259 1190 aaPredicted RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 PRMT2P55345 433 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 TAS2R50P59544 299 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 WDR5P61964 334 aaKnown RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 ARHGEF6Q15052 776 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 ESCO2Q56NI9 601 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 TYW3Q6IPR3 259 aaKnown RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 PGBD2Q6P3X8 592 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 SHFQ7M4L6 423 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 OR8H1Q8NGG4 311 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 LRR1Q96L50 414 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 WFDC6Q9BQY6 131 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 GTPBP2Q9BX10 602 aaKnown RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 RSPO3Q9BXY4 272 aaPredicted RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 OR51B5Q9H339 312 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 PPP1R3EQ9H7J1 279 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 DIMT1Q9UNQ2 313 aaKnown RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 MGAT4BQ9UQ53 548 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 A0A1W2PRB8 838 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 PROM1O43490 865 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 SCO1O75880 301 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 IRS1P35568 1242 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 CLDN20P56880 219 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 PPP3R1P63098 170 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 FABP5Q01469 135 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 MAB21L1Q13394 359 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 DDX53Q86TM3 631 aaKnown RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 SLC37A3Q8NCC5 494 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 GPR32P1Q8NGA4 272 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 NEIL2Q969S2 332 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 GULP1Q9UBP9 304 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 NDOR1Q9UHB4 597 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 CLEC4EQ9ULY5 219 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 C5orf58C9J3I9 102 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 SLC30A4O14863 429 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 TRIM3O75382 744 aaPredicted RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 ZNF821O75541 412 aaPredicted RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 SLC16A8O95907 504 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 FAM157BP0CG42 384 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 ZNF30P17039 623 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 HMGA1P17096 107 aaKnown RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 DDX5P17844 614 aaKnown RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 CD79BP40259 229 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 AVPR1BP47901 424 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
APOB-202ENST00000399256 ABATP80404 500 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 MBTPS1Q14703 1052 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 PLK5Q496M5 336 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 SYT14P1Q58G82 188 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 TOR2AQ5JU69 321 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 REEP3Q6NUK4 255 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 SCAMP4Q969E2 229 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 OMA1Q96E52 524 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 SCRN2Q96FV2 425 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 SLC22A12Q96S37 553 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 WACQ9BTA9 647 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 MVB12BQ9H7P6 319 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 PRELID1Q9Y255 219 aa13.28□□□□□ -0.28
APOB-202ENST00000399256 H1F0P07305 194 aaKnown RBP13.27□□□□□ -0.28
APOB-202ENST00000399256 GSTM1P09488 218 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 WNT4P56705 351 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 MEF2AQ02078 507 aaPredicted RBP13.27□□□□□ -0.28
APOB-202ENST00000399256 TAF12Q16514 161 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 OCLNQ16625 522 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 ZNF57Q68EA5 555 aaPredicted RBP13.27□□□□□ -0.28
APOB-202ENST00000399256 TCTN3Q6NUS6 607 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 USP45Q70EL2 814 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 DUSP18Q8NEJ0 188 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 FBXO22Q8NEZ5 403 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 OR4D11Q8NGI4 311 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 C16orf78Q8WTQ4 265 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 ZC3HAV1LQ96H79 300 aaKnown RBP13.27□□□□□ -0.28
APOB-202ENST00000399256 LINC00597Q9H2U6 94 aa13.27□□□□□ -0.28
APOB-202ENST00000399256 ORC5O43913 435 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 HLA-DQB1P01920 261 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 OR1D2P34982 312 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 SOX18P35713 384 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 TRIM71Q2Q1W2 868 aaKnown RBP13.27□□□□□ -0.29
APOB-202ENST00000399256 MED27Q6P2C8 311 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 QSOX2Q6ZRP7 698 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 MEX3DQ86XN8 651 aaKnown RBP13.27□□□□□ -0.29
APOB-202ENST00000399256 TIGD4Q8IY51 512 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 PCSK9Q8NBP7 692 aaKnown RBP13.27□□□□□ -0.29
APOB-202ENST00000399256 OR4M2Q8NGB6 313 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.27□□□□□ -0.29
APOB-202ENST00000399256 APOBEC4Q8WW27 367 aaKnown RBP13.27□□□□□ -0.29
APOB-202ENST00000399256 RAB8BQ92930 207 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 CXorf40BQ96DE9 158 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 CCDC120Q96HB5 630 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 METTL2AQ96IZ6 378 aaKnown RBP13.27□□□□□ -0.29
APOB-202ENST00000399256 ZNF582Q96NG8 517 aaPredicted RBP13.27□□□□□ -0.29
APOB-202ENST00000399256 DCLRE1CQ96SD1 692 aaKnown RBP13.27□□□□□ -0.29
APOB-202ENST00000399256 SEMA3GQ9NS98 782 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 KCNN3Q9UGI6 736 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 SH2B3Q9UQQ2 575 aa13.27□□□□□ -0.29
APOB-202ENST00000399256 PSIP1O75475 530 aaKnown RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 RPLP2P05387 115 aaKnown RBP13.26□□□□□ -0.29
APOB-202ENST00000399256 KLK1P06870 262 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 NR2F6P10588 404 aa13.26□□□□□ -0.29
APOB-202ENST00000399256 IMPA1P29218 277 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms