RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 TMPRSS11BQ86T26 416 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 GRAMD2AQ8IUY3 354 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC30A8Q8IWU4 369 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 OR4N4Q8N0Y3 316 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 LILRA3Q8N6C8 439 aaPredicted RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 WFDC5Q8TCV5 224 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF431Q8TF32 576 aaPredicted RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 BRI3BPQ8WY22 251 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 KATNB1Q9BVA0 655 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ACAT2Q9BWD1 397 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 SORBS1Q9BX66 1292 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ADARB2Q9NS39 739 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 GLTPQ9NZD2 209 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 C5AR2Q9P296 337 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 RUVBL1Q9Y265 456 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 CD8B2A6NJW9 211 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ZAR1LA6NP61 321 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 KHNYNO15037 678 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PRKYO43930 277 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 BCHEP06276 602 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 CD8BP10966 210 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 CPN2P22792 545 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PKLRP30613 574 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 CSKP41240 450 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC9A3P48764 834 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ALDH9A1P49189 494 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 C19orf57Q0VDD7 668 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PIN1Q13526 163 aaPredicted RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 COL19A1Q14993 1142 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 HEPACAMQ14CZ8 416 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 POM121L1PQ3SYA9 428 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 BRAT1Q6PJG6 821 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 UNC5DQ6UXZ4 953 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PLCZ1Q86YW0 608 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 TM9SF4Q92544 642 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 MAPKAP1Q9BPZ7 522 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF624Q9P2J8 865 aaPredicted RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 IL20RAQ9UHF4 553 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 KCNE1BA0A087WTH5 132 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PIPSLA2A3N6 862 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 NPIPB15A6NHN6 443 aaPredicted RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 H7C0S8 307 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 CELF2O95319 508 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 C1QBP02746 253 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ATF6P18850 670 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 IDSP22304 550 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PCGF2P35227 344 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ATP6V1E1P36543 226 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PREPP48147 710 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 GATMP50440 423 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 LIM2P55344 173 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 RPL6Q02878 288 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 RPA4Q13156 261 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PLEKHM3Q6ZWE6 761 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 APCDD1Q8J025 514 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 GDPD1Q8N9F7 314 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 OR8J2Q8NGG1 315 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 HUS1BQ8NHY5 278 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 GEMIN6Q8WXD5 167 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC9A6Q92581 669 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 MRPS31Q92665 395 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 SCAMP4Q969E2 229 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 SLC6A18Q96N87 628 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 DCLRE1CQ96SD1 692 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 WFDC6Q9BQY6 131 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 SPATA9Q9BWV2 254 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 NKIRAS2Q9NYR9 191 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 CNOT2Q9NZN8 540 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 LHX3Q9UBR4 397 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 A0A1B0GVM2 712 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 SYNDIG1LA6NDD5 238 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 B8ZZF3 427 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 DVL2O14641 736 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 SEPT4O43236 478 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 COCHO43405 550 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 ORC5O43913 435 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 PAHP00439 452 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 CELP19835 753 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 SPAM1P38567 509 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 RRAS2P62070 204 aaPredicted RBP9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 BNC1Q01954 994 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 RHAGQ02094 409 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 MAP4K2Q12851 820 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 DCST1Q5T197 706 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 CXorf57Q6NSI4 855 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 THOC6Q86W42 341 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 OR4M2Q8NGB6 313 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 ANGPTL6Q8NI99 470 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 POP5Q969H6 163 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 PLD4Q96BZ4 506 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 RBFOX1Q9NWB1 397 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 FTSJ1Q9UET6 329 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 ATP6V1HQ9UI12 483 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 RPL36Q9Y3U8 105 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 PCDHB7Q9Y5E2 793 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 ENPP4Q9Y6X5 453 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 TMEM202A6NGA9 273 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 HEPACAM2A8MVW5 462 aa9.38□□□□□ -0.91
PTCHD4-202ENST00000398738 FFAR1O14842 300 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms