RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ZNF334Q9HCZ1 680 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 WASH6PQ9NQA3 447 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 DIMT1Q9UNQ2 313 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 TSPAN19P0C672 248 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 TIA1P31483 386 aaKnown RBP eCLIP15.2■□□□□ 0.026e-7■■□□□ 11.8
CHMP1A-201ENST00000397901 CLDN20P56880 219 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 GRK1Q15835 563 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 KLHL12Q53G59 568 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 CLLU1Q5K131 121 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 ANKRD54Q6NXT1 300 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 TMEM81Q6P7N7 255 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 VANGL1Q8TAA9 524 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 QRFPRQ96P65 431 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 IL4I1Q96RQ9 567 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 RACGAP1Q9H0H5 632 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 ABCB9Q9NP78 766 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 C11orf16Q9NQ32 467 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 ACER3Q9NUN7 267 aa15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 RBFOX1Q9NWB1 397 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 STOX2Q9P2F5 926 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-201ENST00000397901 H0YIV9 168 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC43A1O75387 559 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 PPM1BO75688 479 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 CCNB2O95067 398 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 RAF1P04049 648 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 TPOP07202 933 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 CKMT1AP12532 417 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 CNR2P34972 360 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 POU4F3Q15319 338 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 KLHL17Q6TDP4 642 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 ANKRD33Q7Z3H0 272 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 PHC2Q8IXK0 858 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 LMNTD1Q8N9Z9 388 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 ZBTB44Q8NCP5 570 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 CHTF18Q8WVB6 975 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 MARC2Q969Z3 335 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 DIRAS2Q96HU8 199 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 DEFB118Q96PH6 123 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 ING4Q9UNL4 249 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 CSNK1G3Q9Y6M4 447 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 RNASET2O00584 256 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 PI15O43692 258 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 ORC5O43913 435 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 GADD45GO95257 159 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 LATS1O95835 1130 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 ZNF8P17098 575 aaPredicted RBP15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 EVI2BP34910 448 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 SOX3P41225 446 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 CYP4F8P98187 520 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 WSCD2Q2TBF2 565 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 TMPRSS11BQ86T26 416 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 ASZ1Q8WWH4 475 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 TRMT2BQ96GJ1 504 aaKnown RBP15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 PIP5K1AQ99755 562 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 RAB23Q9ULC3 237 aa15.19■□□□□ 0.02
CHMP1A-201ENST00000397901 SGTAO43765 313 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 HCN1O60741 890 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC16A8O95907 504 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 GASTP01350 101 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 SOD2P04179 222 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 ARSBP15848 533 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 PTX3P26022 381 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 SOAT1P35610 550 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 CHI3L1P36222 383 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 FEN1P39748 380 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 CDK6Q00534 326 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 COL28A1Q2UY09 1125 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 LEXMQ3ZCV2 418 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 SYTL3Q4VX76 610 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 IER5LQ5T953 404 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 TPGS2Q68CL5 300 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 GPR139Q6DWJ6 353 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 CAMKMTQ7Z624 323 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 FAM217AQ8IXS0 508 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 C19orf18Q8NEA5 215 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 ZNF431Q8TF32 576 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 ECHDC3Q96DC8 303 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 VWCEQ96DN2 955 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 MIXL1Q9H2W2 232 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 BRF2Q9HAW0 419 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 THSD1Q9NS62 852 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 CLN6Q9NWW5 311 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 CFAP97Q9P2B7 532 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 ZNF670-ZNF695F2Z2N8 137 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 PRKAR1AP10644 381 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 XCR1P46094 333 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 TGM4P49221 684 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 GBX2P52951 348 aaPredicted RBP15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 ALDH6A1Q02252 535 aaKnown RBP15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 RIPPLY1Q0D2K3 151 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 SPIN4Q56A73 249 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 PLAG1Q6DJT9 500 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 FAM180BQ6P0A1 224 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 C22orf39Q6P5X5 142 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 TAGAPQ8N103 731 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 GHDCQ8N2G8 530 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 SLC37A3Q8NCC5 494 aa15.18■□□□□ 0.02
CHMP1A-201ENST00000397901 CHST14Q8NCH0 376 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms