RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 FKBP14Q9NWM8 211 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 THAP10Q9P2Z0 257 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 RWDD3Q9Y3V2 267 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DENND4AQ7Z401 1863 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SCAMP1O15126 338 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PRKRAO75569 313 aaKnown RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PTHP01270 115 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CHMP24386 653 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SERPINB1P30740 379 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 GJA4P35212 333 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SERPINB10P48595 397 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 PCBP4P57723 403 aaKnown RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 REEP5Q00765 189 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 LRIT3Q3SXY7 679 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 SOWAHCQ53LP3 525 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MLIPQ5VWP3 458 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 FAM109BQ6ICB4 259 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OLIG3Q7RTU3 272 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 UBE3DQ7Z6J8 389 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 NUDT13Q86X67 352 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 MFSD4AQ8N468 514 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ZNF675Q8TD23 568 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 APOBEC4Q8WW27 367 aaKnown RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 ARMC5Q96C12 935 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 CHFRQ96EP1 664 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 OTUB1Q96FW1 271 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 DCSTAMPQ9H295 470 aa17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 IMP3Q9NV31 184 aaKnown RBP17.4■□□□□ 0.38
CHRFAM7A-202ENST00000397827 HMGN4O00479 90 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 NDUFS4O43181 175 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 KAT7O95251 611 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CA3P07451 260 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 GRK5P34947 590 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 MLF2Q15773 248 aaPredicted RBP17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CEP78Q5JTW2 689 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DENND6BQ8NEG7 585 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 B3GNT7Q8NFL0 401 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 INSM2Q96T92 566 aaPredicted RBP17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 C17orf62Q9BQA9 187 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SLC7A5P2Q9GIP4 190 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 KCNK6Q9Y257 313 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CCRL2O00421 344 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 MFN2O95140 757 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ADRA2AP08913 450 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ADORA3P0DMS8 318 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 NAT2P11245 290 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FBXO46Q6PJ61 603 aaPredicted RBP17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR5D16Q8NGK9 328 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 HERVK_113Q902F9 699 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FCGR1BQ92637 280 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TEFMQ96QE5 360 aaKnown RBP17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SERHL2Q9H4I8 314 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 RNF167Q9H6Y7 350 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 NEUROD4Q9HD90 331 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OSGIN1Q9UJX0 560 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PLEKHM1Q9Y4G2 1056 aa17.39■□□□□ 0.37
CHRFAM7A-202ENST00000397827 MYO9BQ13459 2157 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 IGKV1-8A0A0C4DH67 115 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 GLOD5A6NK44 160 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ANHXE9PGG2 379 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ASNA1O43681 348 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 IGFBP1P08833 259 aaPredicted RBP17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 HSMCR30P0CW71 290 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CNR2P34972 360 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FEN1P39748 380 aaKnown RBP17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CSNK1G2P78368 415 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CHRNEQ04844 493 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SEC23BQ15437 767 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 COLEC12Q5KU26 742 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 VITQ6UXI7 678 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DEF8Q6ZN54 512 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 HMGN2P46Q86SG4 172 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 NATD1Q8N6N6 113 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR4D11Q8NGI4 311 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PHOSPHO2Q8TCD6 241 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 S100ZQ8WXG8 99 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 RGMAQ96B86 450 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ROGDIQ9GZN7 287 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 WDR26Q9H7D7 661 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 A4GALTQ9NPC4 353 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FBXO8Q9NRD0 319 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 A0A1W2PP55 124 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SOX14O95416 240 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 HOXB3P14651 431 aaPredicted RBP17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FCARP24071 287 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CCT3P49368 545 aaKnown RBP17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CDC42P60953 191 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 GPM6BQ13491 265 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FGL2Q14314 439 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CST6Q15828 149 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SYPL1Q16563 259 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FAM46CQ5VWP2 391 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FRMPD2BQ6IN97 320 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ZNF770Q6IQ21 691 aaPredicted RBP17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TCTN3Q6NUS6 607 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 AICDAQ9GZX7 198 aa17.38■□□□□ 0.37
CHRFAM7A-202ENST00000397827 LOC100506127A0A0U1RQW1 187 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 A8MVJ9 347 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CD72P21854 359 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CRISP1P54107 249 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms