RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 DPH1Q9BZG8 443 aa18.22■□□□□ 0.51
MAP1LC3A-203ENST00000397709 C19orf25Q9UFG5 118 aaPredicted RBP18.22■□□□□ 0.51
MAP1LC3A-203ENST00000397709 HS3ST3B1Q9Y662 390 aa18.22■□□□□ 0.51
MAP1LC3A-203ENST00000397709 NCOR2Q9Y618 2525 aa18.22■□□□□ 0.51
MAP1LC3A-203ENST00000397709 FREM2Q5SZK8 3169 aa18.22■□□□□ 0.51
MAP1LC3A-203ENST00000397709 A0A1W2PQ72 361 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 ASPDHA6ND91 283 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 CCDC154A6NI56 674 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 CFLARO15519 480 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 CREG1O75629 220 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 SNRPB2P08579 225 aaKnown RBP18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 EFNA1P20827 205 aaPredicted RBP18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 MPIP34949 423 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 NCBP2P52298 156 aaKnown RBP eCLIP18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 SRSF6Q13247 344 aaKnown RBP18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 IL10RAQ13651 578 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 MAPRE2Q15555 327 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 ELAVL1Q15717 326 aaKnown RBP18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 DGAT2L6Q6ZPD8 337 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 PPP1R32Q7Z5V6 425 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 ADAMTS17Q8TE56 1095 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 NACC2Q96BF6 587 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 PPWD1Q96BP3 646 aaKnown RBP18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 NAF1Q96HR8 494 aaKnown RBP18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 OR52E6Q96RD3 313 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 ADAP2Q9NPF8 381 aa18.21■□□□□ 0.51
MAP1LC3A-203ENST00000397709 PRSS51A0A1B0GVH4 220 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 A0A1W2PP18 115 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 A0A1W2PRB8 838 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SOCS6O14544 535 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 OR10H2O60403 315 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 OR4D2P58180 307 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 TLR1Q15399 786 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 VPS26BQ4G0F5 336 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SFT2D3Q587I9 215 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 ZNF551Q7Z340 670 aaPredicted RBP18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 CPEB2Q7Z5Q1 589 aaKnown RBP18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 CLECL1Q8IZS7 167 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 VPS37AQ8NEZ2 397 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 OR9A2Q8NGT5 310 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 ZFP28Q8NHY6 868 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 OR5P2Q8WZ92 322 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 C8orf44Q96CB5 159 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 RBM18Q96H35 190 aaKnown RBP18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 CCDC115Q96NT0 180 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 WDR77Q9BQA1 342 aaPredicted RBP18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SLC25A23Q9BV35 468 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 PNO1Q9NRX1 252 aaKnown RBP18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 BTNL2Q9UIR0 455 aa18.2■□□□□ 0.5
MAP1LC3A-203ENST00000397709 C6orf47O95873 294 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 IFNA16P05015 189 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 WT1P19544 449 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 NT5EP21589 574 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 PRDX6P30041 224 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 OTX2P32243 289 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 PTGER1P34995 402 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 MANFP55145 182 aaKnown RBP18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 EEF1A2Q05639 463 aaKnown RBP18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 LRRC74AQ0VAA2 488 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 MGAT2Q10469 447 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 TERF2Q15554 542 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 LTB4RQ15722 352 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SPRED3Q2MJR0 410 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 PRICKLE4Q2TBC4 344 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 ZNF628Q5EBL2 1059 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 KIRREL2Q6UWL6 708 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 ANKRD46Q86W74 232 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SNX32Q86XE0 403 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 RAB43Q86YS6 212 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 RP9Q8TA86 221 aaKnown RBP18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 PSMA8Q8TAA3 256 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 ZNF675Q8TD23 568 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 PTPMT1Q8WUK0 201 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 ZNF700Q9H0M5 742 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 RMND5AQ9H871 391 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 CXorf21Q9HAI6 301 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SERHLQ9NQF3 203 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 MAN2B2Q9Y2E5 1009 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SSUH2Q9Y2M2 353 aa18.19■□□□□ 0.5
MAP1LC3A-203ENST00000397709 PCSK5Q92824 1860 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 IGHV3-20A0A0C4DH32 117 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 A8MUA0 341 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 C17orf105B2RV13 164 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 KLK10O43240 276 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SLITRK5O94991 958 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 IFI6P09912 130 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 COX6A1P12074 109 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 COX4I1P13073 169 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SOX18P35713 384 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 EIF2S3P41091 472 aaKnown RBP18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 HSPB3Q12988 150 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 CYLC2Q14093 348 aaPredicted RBP18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 KRT72Q14CN4 511 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 PCOLCEQ15113 449 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 MAPKAPK3Q16644 382 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 COQ5Q5HYK3 327 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 SLC2A7Q6PXP3 512 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 TRPM8Q7Z2W7 1104 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 MRGPREQ86SM8 312 aa18.18■□□□□ 0.5
MAP1LC3A-203ENST00000397709 GALNT12Q8IXK2 581 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms