RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 KITLGP21583 273 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 RPS15P62841 145 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 C22orf42Q6IC83 251 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 COMMD7Q86VX2 200 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 ITFG2Q969R8 447 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 FAM122AQ96E09 287 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 KLHDC7BQ96G42 594 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 TMEM74Q96NL1 305 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 LOC730098B7Z3J9 87 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 F5H5K5 113 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 ACOT7O00154 380 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 PAK4O96013 591 aaPredicted RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 SERPINE2P07093 398 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 ERP29P30040 261 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 SEC61A1P61619 476 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 FRG2Q64ET8 278 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 SCAMP5Q8TAC9 235 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 PLD4Q96BZ4 506 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 FRG2BQ96QU4 278 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 SNX18Q96RF0 628 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 BCO2Q9BYV7 579 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 OPA3Q9H6K4 179 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 POMPQ9Y244 141 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 CD300LBA8K4G0 201 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 CLDN7O95471 211 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 ATP1B2P14415 290 aaPredicted RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 ANXA7P20073 488 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 GABRR1P24046 479 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 EVI2BP34910 448 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 APLNRP35414 380 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 YBEYP58557 167 aaPredicted RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 SLC16A10Q8TF71 515 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 PYURFQ96I23 114 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 KLHL13Q9P2N7 655 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 SLC7A8Q9UHI5 535 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 CNTN6Q9UQ52 1028 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 STXBP5LQ9Y2K9 1186 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 NUMA1Q14980 2115 aa11.83□□□□□ -0.51
SMU1-201ENST00000397149 NPIPA7E9PJI5 369 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 H3BSA7 217 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 RETP07949 1114 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 NPIPA8P0DM63 369 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 PIGFQ07326 219 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 SCAPQ12770 1279 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 GPRC6AQ5T6X5 926 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 TMEM71Q6P5X7 295 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 XKR5Q6UX68 686 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 CREB3L2Q70SY1 520 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 RPS27LQ71UM5 84 aaKnown RBP11.83□□□□□ -0.52
SMU1-201ENST00000397149 NPAS4Q8IUM7 802 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 DENND1AQ8TEH3 1009 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 IKZF4Q9H2S9 585 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 ACTL8Q9H568 366 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 AKTIPQ9H8T0 292 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 C2orf42Q9NWW7 574 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 OR14J1Q9UGF5 321 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 WNT6Q9Y6F9 365 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 FAM230AA0A1W2PPH8 454 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 PCDH17O14917 1159 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 CYB5BO43169 146 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 TPSB2P20231 275 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 DRD5P21918 477 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 UFM1P61960 85 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 ARG2P78540 354 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 PTPRRQ15256 657 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 TPSAB1Q15661 275 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 WDR45BQ5MNZ6 344 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 Q8N402 240 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 LRRC52Q8N7C0 313 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 TMEM185AQ8NFB2 350 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 SECISBP2Q96T21 854 aaKnown RBP11.83□□□□□ -0.52
SMU1-201ENST00000397149 A0A1W2PPW3 197 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 RPP30P78346 268 aaKnown RBP11.83□□□□□ -0.52
SMU1-201ENST00000397149 PTPRCAPQ14761 206 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 STEAP4Q687X5 459 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 FCRLBQ6BAA4 426 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 FIGNL1Q6PIW4 674 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 BAIAP2L2Q6UXY1 529 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 PLEKHG7Q6ZR37 379 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 KLBQ86Z14 1044 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 TSPEARQ8WU66 669 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 ZNF419Q96HQ0 510 aaPredicted RBP11.83□□□□□ -0.52
SMU1-201ENST00000397149 PATZ1Q9HBE1 687 aaKnown RBP11.83□□□□□ -0.52
SMU1-201ENST00000397149 ZNF286AQ9HBT8 521 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 RXFP3Q9NSD7 469 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 ZDHHC3Q9NYG2 299 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 SRRDQ9UH36 339 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 HPSEQ9Y251 543 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.83□□□□□ -0.52
SMU1-201ENST00000397149 TMEM233B4DJY2 109 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 HSPB6O14558 160 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 PBX2P40425 430 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 GINS1Q14691 196 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 METTL2BQ6P1Q9 378 aaKnown RBP11.83□□□□□ -0.52
SMU1-201ENST00000397149 TMEM205Q6UW68 189 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 SYT3Q9BQG1 590 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 ASB3Q9Y575 518 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 SLC19A2O60779 497 aa11.83□□□□□ -0.52
SMU1-201ENST00000397149 CNTN5O94779 1100 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms