RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 NUDT13Q86X67 352 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 TMEM178AQ8NBL3 297 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 MDS2Q8NDY4 140 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 TRPC4APQ8TEL6 797 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 NCLNQ969V3 563 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 ANKRD9Q96BM1 317 aaPredicted RBP13.57□□□□□ -0.24
SEC13-208ENST00000397109 C5orf34Q96MH7 638 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 ZNF382Q96SR6 550 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 ZNF717Q9BY31 904 aaPredicted RBP13.57□□□□□ -0.24
SEC13-208ENST00000397109 BRF2Q9HAW0 419 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 NMRK1Q9NWW6 199 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 LRFN1Q9P244 771 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 ADAM29Q9UKF5 820 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 ATG4BQ9Y4P1 393 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 PTPN13Q12923 2485 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 USP9XQ93008 2570 aaPredicted RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 A0A0G2JND7 137 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 PROM1O43490 865 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 DYRK3O43781 588 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 MAN1A2O60476 641 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 NPHS1O60500 1241 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 EEDO75530 441 aaKnown RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 UBOX5O94941 541 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 UNC5CO95185 931 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 ETHE1O95571 254 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 TPP2P29144 1249 aaPredicted RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 TRHRP34981 398 aaPredicted RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 CYB561P49447 251 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 IGLV3-21P80748 117 aaPredicted RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 SRSF1Q07955 248 aaKnown RBP eCLIP13.56□□□□□ -0.24
SEC13-208ENST00000397109 ZNF324BQ6AW86 544 aaPredicted RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 LETMD1Q6P1Q0 360 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 RPS27LQ71UM5 84 aaKnown RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 PTPMT1Q8WUK0 201 aaPredicted RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 SELENOMQ8WWX9 145 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 NR4A3Q92570 626 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 DGAT2Q96PD7 388 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 SIGLEC12Q96PQ1 595 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 SLX1AQ9BQ83 275 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 PELOQ9BRX2 385 aaKnown RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 TMEM120AQ9BXJ8 343 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 TRIM45Q9H8W5 580 aaPredicted RBP13.56□□□□□ -0.24
SEC13-208ENST00000397109 ASB4Q9Y574 426 aa13.56□□□□□ -0.24
SEC13-208ENST00000397109 ARHGAP10A1A4S6 786 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 C17orf105B2RV13 164 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 TMPRSS11DO60235 418 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 FGF17O60258 216 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 AGFG2O95081 481 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 KRT6AP02538 564 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 KRT6BP04259 564 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 NR2F6P10588 404 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 TSPAN8P19075 237 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 STT3AP46977 705 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 KRT6CP48668 564 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 HLCSP50747 726 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 PLIN5Q00G26 463 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 KRT72Q14CN4 511 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 SGO1Q5FBB7 561 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 CFAP157Q5JU67 520 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 C18orf63Q68DL7 685 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 SPINK14Q6IE38 97 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 SLC25A25Q6KCM7 469 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 HSDL2Q6YN16 418 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 GPRIN3Q6ZVF9 776 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 CCNYL1Q8N7R7 359 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 FAM98AQ8NCA5 519 aaKnown RBP13.55□□□□□ -0.24
SEC13-208ENST00000397109 OR8K3Q8NH51 312 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 RFWD2Q8NHY2 731 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 TMEM125Q96AQ2 219 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 SCMH1Q96GD3 660 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 RBM18Q96H35 190 aaKnown RBP13.55□□□□□ -0.24
SEC13-208ENST00000397109 ART5Q96L15 291 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 TAAR6Q96RI8 345 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 MRGBPQ9NV56 204 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 ANKRD10Q9NXR5 420 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 HEY2Q9UBP5 337 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 DCTN4Q9UJW0 460 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 ZNF225Q9UK10 706 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 ZNF223Q9UK11 482 aaPredicted RBP13.55□□□□□ -0.24
SEC13-208ENST00000397109 YARS2Q9Y2Z4 477 aaKnown RBP13.55□□□□□ -0.24
SEC13-208ENST00000397109 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 RELNP78509 3460 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 SPTBN1Q01082 2364 aaKnown RBP13.55□□□□□ -0.24
SEC13-208ENST00000397109 MYOCOSA0A1B0GUC4 107 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 PPP6CO00743 305 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 GUCY1B2O75343 617 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 NEURL1O76050 574 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 OR4F21O95013 312 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 GPR75O95800 540 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 SP1P08047 785 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 HSD3B1P14060 373 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 HSD3B2P26439 372 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 PKNOX1P55347 436 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 ID2Q02363 134 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 FOLH1Q04609 750 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 METTL21CQ5VZV1 264 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 METTL4Q8N3J2 472 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 TMEM156Q8N614 296 aa13.55□□□□□ -0.24
SEC13-208ENST00000397109 OR5L2Q8NGL0 311 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms