RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SNTNA6NMZ2 147 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 FABP7O15540 132 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 RFPL3O75679 317 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF730Q6ZMV8 503 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 CMTM8Q8IZV2 173 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 C2orf73Q8N5S3 287 aaPredicted RBP22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 OR52P1PQ8NH57 321 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 NEIL2Q969S2 332 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 SCRN2Q96FV2 425 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 PLXND1Q9Y4D7 1925 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 TRBV4-1A0A0J9YWV2 114 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 H3BN98 237 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 CKMP06732 381 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF250P15622 560 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 ANKRD54Q6NXT1 300 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 TIGD4Q8IY51 512 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 AP2M1Q96CW1 435 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 ZSCAN5AQ9BUG6 496 aa22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 SPIN1Q9Y657 262 aaPredicted RBP22.8■■□□□ 1.24
CSNK1E-203ENST00000396832 INMT-MINDY4F8WBC2 141 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 GFYI3L273 518 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 TSPAN6O43657 245 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 CTRB1P17538 263 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 IL18Q14116 193 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 PRSS53Q2L4Q9 553 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 SYTL3Q4VX76 610 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 CTRB2Q6GPI1 263 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 TEX261Q6UWH6 196 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 Q6ZVL8 140 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 Q6ZVU0 165 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 DNAJB7Q7Z6W7 309 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 IQCF1Q8N6M8 205 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 WDR48Q8TAF3 677 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 MAGEB10Q96LZ2 347 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 B3GNT4Q9C0J1 378 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 ELF5Q9UKW6 265 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 U3KQ87 197 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 TRBC2A0A5B9 178 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 HPGDSO60760 199 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 TSPAN9O75954 239 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF8P17098 575 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 PDHA2P29803 388 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 ETV3P41162 512 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 CDK6Q00534 326 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 FLYWCH1Q4VC44 716 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF770Q6IQ21 691 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF782Q6ZMW2 699 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 STOX2Q9P2F5 926 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF282Q9UDV7 671 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 ENPP4Q9Y6X5 453 aa22.79■■□□□ 1.24
CSNK1E-203ENST00000396832 AGAP14A8MT82 685 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 CPEP16870 476 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 ENPP1P22413 925 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 PPP3R1P63098 170 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 FKBP1BP68106 108 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 ANGPT1Q15389 498 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 ATAT1Q5SQI0 421 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 ANXA8L1Q5VT79 327 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 TNFAIP8L2Q6P589 184 aaPredicted RBP22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 TCEANCQ8N8B7 351 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF680Q8NEM1 530 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 DSPPQ9NZW4 1301 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 SOCS5O75159 536 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 NAGAP17050 411 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 INPP1P49441 399 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 MPEG1Q2M385 716 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 TMEM201Q5SNT2 666 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 LIPJQ5W064 366 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 TMCO2Q7Z6W1 182 aaPredicted RBP22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 MEX3DQ86XN8 651 aaKnown RBP22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 GPR137Q96N19 417 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 SOSTQ9BQB4 213 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 TMEM43Q9BTV4 400 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 SUV39H2Q9H5I1 410 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 REV1Q9UBZ9 1251 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF106Q9H2Y7 1883 aaKnown RBP22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 CIB4A0PJX0 185 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 SERTM1A2A2V5 107 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 ISM1B1AKI9 464 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 OSMP13725 252 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 TIA1P31483 386 aaKnown RBP eCLIP22.78■■□□□ 1.242e-7■■■■□ 21.7
CSNK1E-203ENST00000396832 GSTM5P46439 218 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 SPINT3P49223 89 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 CTSCP53634 463 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 RPS25P62851 125 aaKnown RBP22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 CRTC2Q53ET0 693 aaPredicted RBP22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 CDKL4Q5MAI5 379 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 SLC8B1Q6J4K2 584 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 CASP12Q6UXS9 341 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 LAPTM4BQ86VI4 370 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 CLP1Q92989 425 aaKnown RBP22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 VOPP1Q96AW1 172 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 MED18Q9BUE0 208 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 EVA1BQ9NVM1 165 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 CFAP97Q9P2B7 532 aa22.78■■□□□ 1.24
CSNK1E-203ENST00000396832 GREM1O60565 184 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 RHCEP18577 417 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 ETV5P41161 510 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 ETV1P50549 477 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 C21orf58P58505 322 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms