RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 FAM72BQ86X60 149 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.94□□□□□ -0.02
GNE-202ENST00000396594 GHDCQ8N2G8 530 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 MRPL43Q8N983 215 aaKnown RBP14.94□□□□□ -0.02
GNE-202ENST00000396594 PMM1Q92871 262 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 ENY2Q9NPA8 101 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 LSM1O15116 133 aaKnown RBP14.94□□□□□ -0.02
GNE-202ENST00000396594 CDKN1CP49918 316 aaPredicted RBP14.94□□□□□ -0.02
GNE-202ENST00000396594 OR12D2P58182 307 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 PRSS58Q8IYP2 241 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 GALNT15Q8N3T1 639 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 MYRFLQ96LU7 910 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 LMF2Q9BU23 707 aaKnown RBP14.94□□□□□ -0.02
GNE-202ENST00000396594 IGLON5A6NGN9 336 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 TBX10O75333 385 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 CREB1P16220 341 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 TSFMP43897 325 aaKnown RBP14.94□□□□□ -0.02
GNE-202ENST00000396594 MISPQ8IVT2 679 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 THAP6Q8TBB0 222 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 FNDC8Q8TC99 324 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 UBTD2Q8WUN7 234 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 NSMAFQ92636 917 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 FAM129BQ96TA1 746 aa14.94□□□□□ -0.02
GNE-202ENST00000396594 A8MUI8 341 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 RPS17P08708 135 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 H2BFMP0C1H6 154 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 THEGLP0DJG4 465 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 CRABP1P29762 137 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 DLX2Q07687 328 aaPredicted RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 MANEAQ5SRI9 462 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 CPZQ66K79 652 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 TMEM225Q6GV28 225 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 ZNF627Q7L945 461 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 C16orf78Q8WTQ4 265 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 ZFPM2Q8WW38 1151 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 SLC30A2Q9BRI3 323 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 NXT1Q9UKK6 140 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 OR1A2Q9Y585 309 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 RAD51DO75771 328 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 PAK4O96013 591 aaPredicted RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 DAP3P51398 398 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 AFF1P51825 1210 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 SIX1Q15475 284 aaPredicted RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 ZNF181Q2M3W8 571 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 FBXO48Q5FWF7 155 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 SERPINA11Q86U17 422 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 CHERPQ8IWX8 916 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 SLC7A13Q8TCU3 470 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 CNN2Q99439 309 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 BRD7Q9NPI1 651 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 ACOT13Q9NPJ3 140 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 ARMC1Q9NVT9 282 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 NOP16Q9Y3C1 178 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 MYH13Q9UKX3 1938 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 HTRA2O43464 458 aaPredicted RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 HCKP08631 526 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 FRKP42685 505 aaPredicted RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 GJA8P48165 433 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 ZNF234Q14588 700 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 GINS1Q14691 196 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 YOD1Q5VVQ6 348 aaPredicted RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 HACD4Q5VWC8 232 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 FUBP1Q96AE4 644 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 ECHDC3Q96DC8 303 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 PKP2Q99959 881 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 ABCB9Q9NP78 766 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 KCNIP3Q9Y2W7 256 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 TPD52L2O43399 206 aaKnown RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 TLX2O43763 284 aaPredicted RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 SRPX2O60687 465 aaPredicted RBP14.93□□□□□ -0.02
GNE-202ENST00000396594 BEST1O76090 585 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 YES1P07947 543 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 ALKAL1Q6UXT8 129 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 UBE2Q1Q7Z7E8 422 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 KLHDC9Q8NEP7 349 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 AKAP1Q92667 903 aaKnown RBP eCLIP14.93□□□□□ -0.02
GNE-202ENST00000396594 POTEKPQ9BYX7 375 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 TOR3AQ9H497 397 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 FAM86C1Q9NVL1 165 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 PCDHA9Q9Y5H5 950 aa14.93□□□□□ -0.02
GNE-202ENST00000396594 RGPD2P0DJD1 1756 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 ZNF140P52738 457 aaPredicted RBP14.92□□□□□ -0.02
GNE-202ENST00000396594 RIDAP52758 137 aaKnown RBP14.92□□□□□ -0.02
GNE-202ENST00000396594 PER3P56645 1201 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 MRPS10P82664 201 aaKnown RBP14.92□□□□□ -0.02
GNE-202ENST00000396594 CSTF1Q05048 431 aaKnown RBP14.92□□□□□ -0.02
GNE-202ENST00000396594 TMPPEQ6ZT21 453 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 SCD5Q86SK9 330 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 HUS1BQ8NHY5 278 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 SETD6Q8TBK2 473 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 HPS1Q92902 700 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 NPLQ9BXD5 320 aaPredicted RBP14.92□□□□□ -0.02
GNE-202ENST00000396594 BCAS3Q9H6U6 928 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 SEC61A2Q9H9S3 476 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 ABCD2Q9UBJ2 740 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 STUB1Q9UNE7 303 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 ZCWPW2A0A1B0GU75 182 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 PRLHRP49683 370 aa14.92□□□□□ -0.02
GNE-202ENST00000396594 MLLT1Q03111 559 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms