RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CMTM3Q96MX0 182 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 OPALINQ96PE5 141 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 EPHX3Q9H6B9 360 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 CACNG4Q9UBN1 327 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 CTSFQ9UBX1 484 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 GTF2A1LQ9UNN4 478 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 DHRS7Q9Y394 339 aa8.06□□□□□ -1.12
NDE1-202ENST00000396355 ZNF236Q9UL36 1845 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 F5H0A9 414 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 FAM72CH0Y354 149 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 TRIM77I1YAP6 450 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 ZNF195O14628 629 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 TERTO14746 1132 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 PCDH17O14917 1159 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 VPS4BO75351 444 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PAK4O96013 591 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 HNF1AP20823 631 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 SOAT1P35610 550 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 MMP12P39900 470 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 NDUFA6P56556 154 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 TPI1P60174 286 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 GABARAPL2P60520 117 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 ETFDHQ16134 617 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 MINDY4Q4G0A6 757 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 FAM72AQ5TYM5 149 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 KIAA1614Q5VZ46 1190 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 FAM72DQ6L9T8 149 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 TIFABQ6ZNK6 161 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 FAM72BQ86X60 149 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 MARCH9Q86YJ5 346 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 SAMD12Q8N8I0 201 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 KLHDC9Q8NEP7 349 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 RPLP0P6Q8NHW5 317 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 WDR20Q8TBZ3 569 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 EDEM1Q92611 657 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 TTC9Q92623 222 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PTP4A1Q93096 173 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PGAP3Q96FM1 320 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 P2RY11Q96G91 374 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 FCRL3Q96P31 734 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 GPR78Q96P69 363 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 RNF39Q9H2S5 420 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 TEX10Q9NXF1 929 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 ADAM28Q9UKQ2 775 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 A0A075B6Q4 140 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 A0A0A0MRY4 1105 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 A0A0A6YYJ9 748 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 KANTRA0A1W2PQU2 76 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 CLDN5O00501 218 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 SIGLEC6O43699 453 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 GPR32O75388 356 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 RECQL4O94761 1208 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 SOX14O95416 240 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PRAMEF12O95522 483 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 EPOP01588 193 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 CYP17A1P05093 508 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 KLK3P07288 261 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 SELPP16109 830 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PFKLP17858 780 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 HMGCLP35914 325 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 LARS2Q15031 903 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 LTB4RQ15722 352 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 OR2B11Q5JQS5 317 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 C1orf53Q5VUE5 145 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 LIN54Q6MZP7 749 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 H3F3CQ6NXT2 135 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PRSS48Q7RTY5 328 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 ZNF467Q7Z7K2 595 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 TSPAN33Q86UF1 283 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 MAML2Q8IZL2 1156 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 SVBPQ8N300 66 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 IL17RCQ8NAC3 791 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 BSCL2Q96G97 398 aaPredicted RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 SPATA13Q96N96 652 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 FTHL17Q9BXU8 183 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 AMBRA1Q9C0C7 1298 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 ACTL8Q9H568 366 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 METTL8Q9H825 291 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 DDIT4Q9NX09 232 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 GNG8Q9UK08 70 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 FZD10Q9ULW2 581 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 SLC6A14Q9UN76 642 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 RPS10-NUDT3A0A1W2PQS6 291 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 TNFRSF11BO00300 401 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 EIF3GO75821 320 aaKnown RBP eCLIP8.05□□□□□ -1.12
NDE1-202ENST00000396355 GADD45GO95257 159 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 PNPP00491 289 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 OPN1SWP03999 348 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 CD3GP09693 182 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 H2AFB2P0C5Z0 115 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 OR56A5P0C7T3 313 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 CPB1P15086 417 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 HTR2AP28223 471 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 RPS10P46783 165 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 MECP2P51608 486 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 AFF3P51826 1226 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 CTBP2P56545 445 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 AP3S2P59780 193 aa8.05□□□□□ -1.12
NDE1-202ENST00000396355 ADARB1P78563 741 aaKnown RBP8.05□□□□□ -1.12
NDE1-202ENST00000396355 PRR5P85299 388 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms