RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TRIM69Q86WT6 500 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 TMEM192Q8IY95 271 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 OR10K1Q8NGX5 313 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 PIH1D2Q8WWB5 315 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 ZNF599Q96NL3 588 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 OR52E6Q96RD3 313 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 SOSTQ9BQB4 213 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 SNX10Q9Y5X0 201 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 C2orf78A6NCI8 922 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 CXorf65A6NEN9 183 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 WASH3PC4AMC7 463 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 RFXAPO00287 272 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 OIP5O43482 229 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 STBD1O95210 358 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 BPIP17213 487 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 NFYAP23511 347 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 EIF2S3P41091 472 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 PDZK1IP1Q13113 114 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 ERV3-1Q14264 604 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 GANABQ14697 944 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 GSG1Q2KHT4 349 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 MACC1Q6ZN28 852 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 WDR53Q7Z5U6 358 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 C7orf31Q8N865 590 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 OR10H5Q8NGA6 315 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 HMGB4Q8WW32 186 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 AP3S1Q92572 193 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 MRPL38Q96DV4 380 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 RSRP1Q9BUV0 290 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 DPAGT1Q9H3H5 408 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 CA10Q9NS85 328 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 MARCH4Q9P2E8 410 aaPredicted RBP11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 CPA4Q9UI42 421 aa11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 SAMD4AQ9UPU9 718 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 LSM2Q9Y333 95 aaKnown RBP11.94□□□□□ -0.5
SLC28A1-203ENST00000394573 YDJCA8MPS7 323 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 MID1O15344 667 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 UBXN7O94888 489 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 LGI1O95970 557 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 CD3GP09693 182 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 CDKN2CP42773 168 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 EIF2S3LQ2VIR3 472 aaKnown RBP11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 C3orf38Q5JPI3 329 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 ANKS6Q68DC2 871 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 EFCAB12Q6NXP0 572 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 DOK6Q6PKX4 331 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 CMIPQ8IY22 773 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 RFT1Q96AA3 541 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 FCRL1Q96LA6 429 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 CDCA7Q9BWT1 371 aaPredicted RBP11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 CACNG6Q9BXT2 260 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 UNKLQ9H9P5 680 aaKnown RBP11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 MED11Q9P086 117 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 SNX11Q9Y5W9 270 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 FAM170BA6NMN3 283 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 HCRTO43612 131 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 SUSD5O60279 629 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 B4GALT3O60512 393 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 MT-ND4P03905 459 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 ITPKAP23677 461 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 GCGRP47871 477 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 ARSDP51689 593 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 SPCS3P61009 180 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 BCL2L1Q07817 233 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 FAM187BQ17R55 369 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 MICBQ29980 383 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 SGO1Q5FBB7 561 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 ATAT1Q5SQI0 421 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 NHLRC1Q6VVB1 395 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 KLBQ86Z14 1044 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 DCUN1D3Q8IWE4 304 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 STK40Q8N2I9 435 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 OR10G2Q8NGC3 310 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 TMEM163Q8TC26 289 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 CHFRQ96EP1 664 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 MASTLQ96GX5 879 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 ART5Q96L15 291 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 ATF6BQ99941 703 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 TBL1YQ9BQ87 522 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 LINC00597Q9H2U6 94 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 MROH8Q9H579 483 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 EXOSC3Q9NQT5 275 aaKnown RBP11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 MRPL15Q9P015 296 aaKnown RBP11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 EPHA6Q9UF33 1036 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 PISDQ9UG56 409 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 SIX4Q9UIU6 781 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 PCDHA10Q9Y5I2 948 aa11.93□□□□□ -0.5
SLC28A1-203ENST00000394573 A0A0C4DFX4 3053 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 FXYD6-FXYD2A0A087WZ82 144 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 PLSCR5A0PG75 271 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 DDTLA6NHG4 134 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 SLC9B1P1A6NJY1 282 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 MCRIP1C9JLW8 97 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 PRR23D1E9PI22 279 aaPredicted RBP11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 DGAT1O75907 488 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 HPP00738 406 aa11.92□□□□□ -0.5
SLC28A1-203ENST00000394573 SERPINA3P01011 423 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms