RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 HMGN4O00479 90 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 NDUFS4O43181 175 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 RPLP0P05388 317 aaKnown RBP18.55■□□□□ 0.56
RCCD1-201ENST00000394258 OR12D1P0DN82 309 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 CXCR2P25025 360 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 CCT3P49368 545 aaKnown RBP18.55■□□□□ 0.56
RCCD1-201ENST00000394258 RGS6P49758 472 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 HMGA2P52926 109 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 PDGFRLQ15198 375 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 SYPL1Q16563 259 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 HDAC8Q9BY41 377 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 TRPC4Q9UBN4 977 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 IFT52Q9Y366 437 aa18.55■□□□□ 0.56
RCCD1-201ENST00000394258 OR52A4PA6NMU1 304 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 SLC28A2O43868 658 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 MFN2O95140 757 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 KAT7O95251 611 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 CA3P07451 260 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 GJA4P35212 333 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 CDC42P60953 191 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 MLF2Q15773 248 aaPredicted RBP18.54■□□□□ 0.56
RCCD1-201ENST00000394258 FRMPD2BQ6IN97 320 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 BCDIN3DQ7Z5W3 292 aaKnown RBP18.54■□□□□ 0.56
RCCD1-201ENST00000394258 NUDT13Q86X67 352 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 KIAA1958Q8N8K9 716 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 DENND6BQ8NEG7 585 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 OR4D11Q8NGI4 311 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 TEFMQ96QE5 360 aaKnown RBP18.54■□□□□ 0.56
RCCD1-201ENST00000394258 SERHL2Q9H4I8 314 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 KLHL31Q9H511 634 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 KCNK12Q9HB15 430 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 OR10H3O60404 316 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 RPN2P04844 631 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 GPC1P35052 558 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 UGT2B10P36537 528 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 CRISP1P54107 249 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 TCTN3Q6NUS6 607 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 LACC1Q8IV20 430 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 LYSMD2Q8IV50 215 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 RGMAQ96B86 450 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 PELI2Q9HAT8 420 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 WASH6PQ9NQA3 447 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 FTSJ1Q9UET6 329 aa18.54■□□□□ 0.56
RCCD1-201ENST00000394258 AGAP5A6NIR3 686 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 ZW10O43264 779 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 SEMA3DO95025 777 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 ERGP11308 486 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 CD72P21854 359 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 PCBP4P57723 403 aaKnown RBP18.53■□□□□ 0.56
RCCD1-201ENST00000394258 TSTQ16762 297 aaKnown RBP18.53■□□□□ 0.56
RCCD1-201ENST00000394258 AGBL4Q5VU57 503 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 STEAP3Q658P3 488 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 USP43Q70EL4 1123 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 HDDC3Q8N4P3 179 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 JPH3Q8WXH2 748 aaPredicted RBP18.53■□□□□ 0.56
RCCD1-201ENST00000394258 DPH7Q9BTV6 452 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 MMP27Q9H306 513 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 TP63Q9H3D4 680 aaPredicted RBP18.53■□□□□ 0.56
RCCD1-201ENST00000394258 WDR26Q9H7D7 661 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 CTPS2Q9NRF8 586 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 WDR70Q9NW82 654 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 THAP10Q9P2Z0 257 aaPredicted RBP18.53■□□□□ 0.56
RCCD1-201ENST00000394258 KLHL20Q9Y2M5 609 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 PCDHGA3Q9Y5H0 932 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 SNRNP200O75643 2136 aaKnown RBP18.53■□□□□ 0.56
RCCD1-201ENST00000394258 IGKV1-8A0A0C4DH67 115 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 ERAL1O75616 437 aaKnown RBP18.53■□□□□ 0.56
RCCD1-201ENST00000394258 SSR2P43308 183 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 CSNK1G2P78368 415 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 REEP5Q00765 189 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 KRT33BQ14525 404 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 IRF3Q14653 427 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 ARHGAP19Q14CB8 494 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 ZNF750Q32MQ0 723 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 TPRG1LQ5T0D9 272 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 SEC14L3Q9UDX4 400 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 KLHL3Q9UH77 587 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 DPP7Q9UHL4 492 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 TMCC3Q9ULS5 477 aa18.53■□□□□ 0.56
RCCD1-201ENST00000394258 PRAMEF27A3QJZ7 478 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 H3BN98 237 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 KMOO15229 486 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 UPK1BO75841 260 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 SPNP16150 400 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 SERPINB1P30740 379 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 SOX9P48436 509 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 TUBA1BP68363 451 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 GPM6BQ13491 265 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 PIN1Q13526 163 aaPredicted RBP18.52■□□□□ 0.56
RCCD1-201ENST00000394258 FGL2Q14314 439 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 IRF4Q15306 451 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 FAM46CQ5VWP2 391 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 ZNF770Q6IQ21 691 aaPredicted RBP18.52■□□□□ 0.56
RCCD1-201ENST00000394258 PSRC1Q6PGN9 363 aaPredicted RBP18.52■□□□□ 0.56
RCCD1-201ENST00000394258 VITQ6UXI7 678 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 TUBA1AQ71U36 451 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 COMTD1Q86VU5 262 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 LSRQ86X29 649 aaPredicted RBP18.52■□□□□ 0.56
RCCD1-201ENST00000394258 CYP4Z2PQ8N1L4 340 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 GANCQ8TET4 914 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms