RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 EBPQ15125 230 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 HSPB2Q16082 182 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 KBTBD12Q3ZCT8 623 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 ARSKQ6UWY0 536 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 RNF111Q6ZNA4 994 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 DGAT2L6Q6ZPD8 337 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 RAPH1Q70E73 1250 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 CTAGE3PQ8IX95 158 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 EXT2Q93063 718 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 TP53INP1Q96A56 240 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 PPWD1Q96BP3 646 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 SECISBP2Q96T21 854 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 WWTR1Q9GZV5 400 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 EXO5Q9H790 373 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 CNOT11Q9UKZ1 510 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 ASB4Q9Y574 426 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 MAP1AP78559 2803 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 A0A0A6YYD5 115 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 CAPN14A8MX76 684 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 UBXN8O00124 270 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 HRKO00198 91 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 FOXE1O00358 373 aaPredicted RBP16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 SAP18O00422 153 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 RFPL3SP0C7P2 107 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 SLC35E2P0CK97 266 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 STX2P32856 288 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 SETDB1Q15047 1291 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 FBXL19-AS1Q494R0 122 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 C18orf63Q68DL7 685 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 CMC1Q7Z7K0 106 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 ULK2Q8IYT8 1036 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 TAGAPQ8N103 731 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 SPATA4Q8NEY3 305 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 RIT1Q92963 219 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 SORBS1Q9BX66 1292 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 EDARQ9UNE0 448 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 ACOT9Q9Y305 439 aa16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 ANKHD1Q8IWZ3 2542 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-202ENST00000394082 ARHGAP21Q5T5U3 1957 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 A0A087X1B8 175 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 OR10H2O60403 315 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 TRIM3O75382 744 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 SNX4O95219 450 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 BSGP35613 385 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 TIMP3P35625 211 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 PIK3CGP48736 1102 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 IST1P53990 364 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ALDH18A1P54886 795 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 HERVK_113P63132 956 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ERVK-8P63133 956 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 PCBP2Q15366 365 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 SF3B4Q15427 424 aaKnown RBP eCLIP16.07■□□□□ 0.162e-9■■■■■ 35.9
SNRPA1-202ENST00000394082 FAM83EQ2M2I3 478 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 TEX9Q8N6V9 391 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 PPM1NQ8N819 430 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ZNF441Q8N8Z8 693 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 L3MBTL4Q8NA19 623 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 C17orf47Q8NEP4 570 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 OR10G3Q8NGC4 313 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 SREK1Q8WXA9 508 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 LRRC46Q96FV0 321 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 MTERF1Q99551 399 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 DOHHQ9BU89 302 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 CNPPD1Q9BV87 410 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ERVK-6Q9BXR3 956 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 DPH5Q9H2P9 285 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ACTR8Q9H981 624 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 WDR41Q9HAD4 459 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 PRM3Q9NNZ6 103 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 DNAJB12Q9NXW2 375 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ZNF629Q9UEG4 869 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 FOXD3Q9UJU5 478 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ERVK-19Q9WJR5 959 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ANGPTL3Q9Y5C1 460 aa16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 TNPO3Q9Y5L0 923 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-202ENST00000394082 ZNF469Q96JG9 3925 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 A0A1W2PR48 441 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 TP53I11O14683 189 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 RAD51CO43502 376 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 SH3BGRLO75368 114 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 EPPINO95925 133 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 CLPSP04118 112 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 FAM58BPP0C7Q3 252 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 NR2F6P10588 404 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 CEACAM8P31997 349 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 KIR2DL3P43628 341 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 TMED10P49755 219 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 RPS13P62277 151 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 DDX39BQ13838 428 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 ZNF267Q14586 743 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 SLMAPQ14BN4 828 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 ACAP2Q15057 778 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 RPS6KA2Q15349 733 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 C10orf62Q5T681 223 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 PRAMEF20Q5VT98 475 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 TMEM198Q66K66 360 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 SEM1Q6ZVN7 128 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 PM20D2Q8IYS1 436 aa16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 CENPLQ8N0S6 344 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-202ENST00000394082 LIX1Q8N485 282 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms