RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CASP2P42575 452 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 HNRNPH2P55795 449 aaKnown RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 SLC37A1P57057 533 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 DCAF7P61962 342 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 CHIT1Q13231 466 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 LAPTM5Q13571 262 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 DCST1Q5T197 706 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 FNDC7Q5VTL7 733 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 BICRALQ6AI39 1079 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 SULT1C3Q6IMI6 304 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 RNF111Q6ZNA4 994 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 GPSM1Q86YR5 675 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 LRRC8AQ8IWT6 810 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 ST13P4Q8IZP2 240 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 C7orf57Q8NEG2 295 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 MBD3L2Q8NHZ7 208 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 DOK4Q8TEW6 326 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 ARSGQ96EG1 525 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 PHACTR1Q9C0D0 580 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 CAB39LQ9H9S4 337 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 SMYD2Q9NRG4 433 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 RYDENQ9NUL5 291 aaKnown RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 PTBP2Q9UKA9 531 aaKnown RBP14.08□□□□□ -0.16
CHMP3-202ENST00000393773 IKBKGQ9Y6K9 419 aa14.08□□□□□ -0.16
CHMP3-202ENST00000393773 ANKRD33BA6NCL7 494 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 DYRK3O43781 588 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 HRGP04196 525 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 HPNP05981 417 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 INHBBP09529 407 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 CD53P19397 219 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 CDK9P50750 372 aaKnown RBP14.07□□□□□ -0.16
CHMP3-202ENST00000393773 IRF8Q02556 426 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 RPS6KA2Q15349 733 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 AP5B1Q2VPB7 878 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 NHSL2Q5HYW2 709 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 TBCELQ5QJ74 424 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 KHDRBS2Q5VWX1 349 aaKnown RBP14.07□□□□□ -0.16
CHMP3-202ENST00000393773 FBXW10Q5XX13 1052 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 C18orf63Q68DL7 685 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 VASNQ6EMK4 673 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 SLC29A4Q7RTT9 530 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 LRRC70Q7Z2Q7 622 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 KIF18BQ86Y91 864 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 PM20D2Q8IYS1 436 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 LINC01560Q8TB33 94 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 KRT12Q99456 494 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 RPF2Q9H7B2 306 aaKnown RBP14.07□□□□□ -0.16
CHMP3-202ENST00000393773 C15orf41Q9Y2V0 281 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 ARID1AO14497 2285 aa14.07□□□□□ -0.16
CHMP3-202ENST00000393773 CD8B2A6NJW9 211 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 OR6C76A6NM76 312 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 EEF1E1-BLOC1S5C9J1V9 151 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 CES2O00748 559 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 PLPP1O14494 284 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 PHGDHO43175 533 aaKnown RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 EEF1E1O43324 174 aaKnown RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 CCNT2O60583 730 aaKnown RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 PIAS1O75925 651 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 TGFB1P01137 390 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 HEXAP06865 529 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 CCDC166P0CW27 439 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 PCNAP12004 261 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 SERPINB1P30740 379 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 SOX18P35713 384 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 ARL4CP56559 192 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 POU4F1Q01851 419 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 SLAMF1Q13291 335 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 ZNF267Q14586 743 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 PCBP2Q15366 365 aaKnown RBP eCLIP14.06□□□□□ -0.166e-7■■■■■ 44.5
CHMP3-202ENST00000393773 HIST2H2ACQ16777 129 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 TMEM198Q66K66 360 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 HIST2H2AA3Q6FI13 130 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 OR4C11Q6IEV9 310 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 MED27Q6P2C8 311 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 CHSY3Q70JA7 882 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 CXorf67Q86X51 503 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 RNF175Q8N4F7 328 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 OR7G3Q8NG95 312 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 DIO2Q92813 273 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 TANKQ92844 425 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 EXT2Q93063 718 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 NTNG2Q96CW9 530 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 CMTM7Q96FZ5 175 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 RILPQ96NA2 401 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 PELOQ9BRX2 385 aaKnown RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 ZNF717Q9BY31 904 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 UGT2B28Q9BY64 529 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 OR51B5Q9H339 312 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 BEX4Q9NWD9 120 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 MS4A12Q9NXJ0 267 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 NSMCE4AQ9NXX6 385 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 PHF11Q9UIL8 331 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 SNX12Q9UMY4 172 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 CAMK2AQ9UQM7 478 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 MTO1Q9Y2Z2 717 aaKnown RBP14.06□□□□□ -0.16
CHMP3-202ENST00000393773 SLC6A5Q9Y345 797 aa14.06□□□□□ -0.16
CHMP3-202ENST00000393773 IQANK1A0A1B0GTG1 560 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms