RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ATG4BQ9Y4P1 393 aa12.78□□□□□ -0.36
PTN-202ENST00000393083 A0A1W2PR48 441 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 C1orf226A1L170 272 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 STMND1H3BQB6 276 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 B3GALT2O43825 422 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 C8BP07358 591 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 NR2F6P10588 404 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 LIPCP11150 499 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 NCK1P16333 377 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 SOAT1P35610 550 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 ITGA1P56199 1179 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 HBA1P69905 142 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 CLN3Q13286 438 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 TGIF1Q15583 401 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 FAM180BQ6P0A1 224 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 SLC38A9Q8NBW4 561 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 TNIP2Q8NFZ5 429 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 GOT1L1Q8NHS2 421 aaPredicted RBP12.77□□□□□ -0.36
PTN-202ENST00000393083 UCN3Q969E3 161 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 NKD1Q969G9 470 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 ZNF583Q96ND8 569 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 KAT8Q9H7Z6 458 aaKnown RBP12.77□□□□□ -0.36
PTN-202ENST00000393083 SLAMF7Q9NQ25 335 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 STX18Q9P2W9 335 aaKnown RBP12.77□□□□□ -0.36
PTN-202ENST00000393083 PHF11Q9UIL8 331 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 MAGEL2Q9UJ55 1249 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 ERVK-11Q9UQG0 969 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 PCDHB3Q9Y5E6 796 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 ZFHX4Q86UP3 3567 aa12.77□□□□□ -0.36
PTN-202ENST00000393083 URB1O60287 2271 aaKnown RBP12.77□□□□□ -0.37
PTN-202ENST00000393083 A0A087WV48 116 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 TEX51A0A1B0GUA7 166 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 ZNF860A6NHJ4 632 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 GLOD5A6NK44 160 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 TXNDC9O14530 226 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 SCRG1O75711 98 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 OR2B3O76000 313 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 C1QCP02747 245 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 NTRK1P04629 796 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 ANPEPP15144 967 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
PTN-202ENST00000393083 NTSP30990 170 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 GCGRP47871 477 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 SESN3P58005 492 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 TNFRSF17Q02223 184 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 ABHD18Q0P651 414 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 MAP7Q14244 749 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 FXNQ16595 210 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 C18orf63Q68DL7 685 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 ZFP1Q6P2D0 407 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 GPR155Q7Z3F1 870 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 CALHM3Q86XJ0 350 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 TMEM126BQ8IUX1 230 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 CLEC4FQ8N1N0 589 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 C10orf111Q8N326 155 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 TRIML2Q8N7C3 387 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 PNPT1Q8TCS8 783 aaKnown RBP12.77□□□□□ -0.37
PTN-202ENST00000393083 ZFP90Q8TF47 636 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 KCNE4Q8WWG9 221 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 OR5P2Q8WZ92 322 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 ZBED6CLQ96FA7 236 aaPredicted RBP12.77□□□□□ -0.37
PTN-202ENST00000393083 NAF1Q96HR8 494 aaKnown RBP12.77□□□□□ -0.37
PTN-202ENST00000393083 SLC35A5Q9BS91 424 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 DPH1Q9BZG8 443 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 TPT1P8Q9HAU6 139 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 TAS2R9Q9NYW1 312 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 UTS2RQ9UKP6 389 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 CORO2BQ9UQ03 480 aa12.77□□□□□ -0.37
PTN-202ENST00000393083 LAMA5O15230 3695 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 SPTBP11277 2137 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 MAP1BP46821 2468 aaKnown RBP12.76□□□□□ -0.37
PTN-202ENST00000393083 TCRBV3S1A0A5B6 114 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 H3BNX3 289 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 GSTA4O15217 222 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 ZNF749O43361 778 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 PROM1O43490 865 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 RAD1O60671 282 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 SRPX2O60687 465 aaPredicted RBP12.76□□□□□ -0.37
PTN-202ENST00000393083 BAG2O95816 211 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 CPN2P22792 545 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 BUD31P41223 144 aaPredicted RBP12.76□□□□□ -0.37
PTN-202ENST00000393083 FRKP42685 505 aaPredicted RBP12.76□□□□□ -0.37
PTN-202ENST00000393083 MANFP55145 182 aaKnown RBP12.76□□□□□ -0.37
PTN-202ENST00000393083 OLR1P78380 273 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 SLC34A1Q06495 639 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 COL9A2Q14055 689 aaPredicted RBP12.76□□□□□ -0.37
PTN-202ENST00000393083 CYP51A1Q16850 503 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 PRTGQ2VWP7 1150 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 PRSS41Q7RTY9 318 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 SPPL2CQ8IUH8 684 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 MICU2Q8IYU8 434 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 GPR135Q8IZ08 494 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 NLGN4XQ8N0W4 816 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 GALNT6Q8NCL4 622 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 NLGN4YQ8NFZ3 816 aaPredicted RBP12.76□□□□□ -0.37
PTN-202ENST00000393083 N4BP2L2Q92802 583 aaPredicted RBP12.76□□□□□ -0.37
PTN-202ENST00000393083 NEUROD4Q9HD90 331 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 SLC35C2Q9NQQ7 365 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 IRAK4Q9NWZ3 460 aa12.76□□□□□ -0.37
PTN-202ENST00000393083 TAS2R7Q9NYW3 318 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms