RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ABRAXAS2Q15018 415 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 REP15Q6BDI9 236 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 AGTRAPQ6RW13 159 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 TBPL2Q6SJ96 375 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 SYT13Q7L8C5 426 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 OR4K3Q96R72 315 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 TPSD1Q9BZJ3 242 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 SPATA6Q9NWH7 488 aaPredicted RBP18.05■□□□□ 0.48
CCDC50-202ENST00000392456 KCNK6Q9Y257 313 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 SLC17A4Q9Y2C5 497 aa18.05■□□□□ 0.48
CCDC50-202ENST00000392456 BTN3A3O00478 584 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 UBDO15205 165 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 PSMA4P25789 261 aaKnown RBP18.04■□□□□ 0.48
CCDC50-202ENST00000392456 TEAD1P28347 426 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 HNF4AP41235 474 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 AKR1D1P51857 326 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 DGKEP52429 567 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 METRNLQ641Q3 311 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 JAZF1Q86VZ6 243 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 ADHFE1Q8IWW8 467 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 TRPV3Q8NET8 790 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 OR5AR1Q8NGP9 310 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 ASB12Q8WXK4 309 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 MED8Q96G25 268 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 RANBP3Q9H6Z4 567 aaPredicted RBP18.04■□□□□ 0.48
CCDC50-202ENST00000392456 LTB4R2Q9NPC1 389 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 HPF1Q9NWY4 346 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 FBXL21Q9UKT6 434 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 PLAGL1Q9UM63 463 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 SLCO1B1Q9Y6L6 691 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 VPS13AQ96RL7 3174 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 SEMA4FO95754 770 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 CCNYL3P0C7X3 344 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 HSMCR30P0CW71 290 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 SOX11P35716 441 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 GRIK2Q13002 908 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 PRKG2Q13237 762 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 XKR7Q5GH72 579 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 PDSS1Q5T2R2 415 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 LAIR2Q6ISS4 152 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 IL27RAQ6UWB1 636 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 OR8H3Q8N146 312 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 OXR1Q8N573 874 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 OR9I1Q8NGQ6 314 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 ZNF480Q8WV37 535 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 MTFMTQ96DP5 389 aaKnown RBP18.04■□□□□ 0.48
CCDC50-202ENST00000392456 IL17FQ96PD4 163 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 CCDC32Q9BV29 185 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 NTMT1Q9BV86 223 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 SHARPINQ9H0F6 387 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 DPEP2Q9H4A9 486 aa18.04■□□□□ 0.48
CCDC50-202ENST00000392456 RAB19A4D1S5 217 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 DFNA5O60443 496 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 HGFP14210 728 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 OXTRP30559 389 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 ETV6P41212 452 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 CAPZA2P47755 286 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 FASTKQ14296 549 aaKnown RBP18.03■□□□□ 0.48
CCDC50-202ENST00000392456 CPSF6Q16630 551 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC50-202ENST00000392456 MEP1AQ16819 746 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 GTDC1Q4AE62 458 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 SGO1Q5FBB7 561 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 CCDC90BQ9GZT6 254 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 C14orf119Q9NWQ9 140 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 RAB23Q9ULC3 237 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 ASF1AQ9Y294 204 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 LOC110117498-PIK3R3F6TDL0 507 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 IGHV4-34P06331 123 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 MEOX2P50222 304 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 DIO3P55073 304 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 PER3P56645 1201 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 ALDH6A1Q02252 535 aaKnown RBP18.03■□□□□ 0.48
CCDC50-202ENST00000392456 FADDQ13158 208 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 CTU2Q2VPK5 515 aaKnown RBP18.03■□□□□ 0.48
CCDC50-202ENST00000392456 PYCR3Q53H96 274 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 ANKRD39Q53RE8 183 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 ZNF782Q6ZMW2 699 aaPredicted RBP18.03■□□□□ 0.48
CCDC50-202ENST00000392456 TRIM69Q86WT6 500 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 C2orf73Q8N5S3 287 aaPredicted RBP18.03■□□□□ 0.48
CCDC50-202ENST00000392456 OR7G3Q8NG95 312 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 DCLRE1CQ96SD1 692 aaKnown RBP18.03■□□□□ 0.48
CCDC50-202ENST00000392456 NUSAP1Q9BXS6 441 aaKnown RBP18.03■□□□□ 0.48
CCDC50-202ENST00000392456 OSGEPL1Q9H4B0 414 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 REV1Q9UBZ9 1251 aa18.03■□□□□ 0.48
CCDC50-202ENST00000392456 CHURC1-FNTBB4DL54 471 aa18.02■□□□□ 0.48
CCDC50-202ENST00000392456 CLCNKAP51800 687 aa18.02■□□□□ 0.48
CCDC50-202ENST00000392456 GPR68Q15743 365 aa18.02■□□□□ 0.48
CCDC50-202ENST00000392456 SYT6Q5T7P8 510 aaPredicted RBP18.02■□□□□ 0.48
CCDC50-202ENST00000392456 C8orf82Q6P1X6 216 aaPredicted RBP18.02■□□□□ 0.48
CCDC50-202ENST00000392456 LRRC70Q7Z2Q7 622 aa18.02■□□□□ 0.48
CCDC50-202ENST00000392456 SPPL2CQ8IUH8 684 aa18.02■□□□□ 0.48
CCDC50-202ENST00000392456 OR4D10Q8NGI6 311 aa18.02■□□□□ 0.48
CCDC50-202ENST00000392456 TFGQ92734 400 aaPredicted RBP18.02■□□□□ 0.48
CCDC50-202ENST00000392456 RADILQ96JH8 1075 aa18.02■□□□□ 0.48
CCDC50-202ENST00000392456 KAT8Q9H7Z6 458 aaKnown RBP18.02■□□□□ 0.48
CCDC50-202ENST00000392456 ACTR8Q9H981 624 aa18.02■□□□□ 0.48
CCDC50-202ENST00000392456 EFCAB9A8MZ26 197 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 C10orf142B7Z368 130 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 C9JVG2 144 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 ALPPP05187 535 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms