RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 HPF1Q9NWY4 346 aa11.77□□□□□ -0.53
GGPS1-203ENST00000391855 UBR5O95071 2799 aaPredicted RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 NBASA2RRP1 2371 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 GNG14A0A1W2PPG7 69 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 TMEM200CA6NKL6 621 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 PGRMC2O15173 223 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 RGS16O15492 202 aaPredicted RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 PRKNO60260 465 aaPredicted RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 NPHS1O60500 1241 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 ERLIN1O75477 346 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 CHEK2O96017 543 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 NEFHP12036 1026 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 CPMP14384 443 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 DRD2P14416 443 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 PORP16435 677 aaPredicted RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 CSNK2A2P19784 350 aaPredicted RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 TDGF1P3P51864 188 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 ERVK-8P63133 956 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF844Q08AG5 666 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 HEPACAMQ14CZ8 416 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 TRIM46Q7Z4K8 759 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 SLC15A4Q8N697 577 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 FAM76AQ8TAV0 307 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 TCP10LQ8TDR4 215 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 PPWD1Q96BP3 646 aaKnown RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 TM4SF18Q96CE8 201 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 SGCZQ96LD1 299 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 FRMD6Q96NE9 622 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 C12orf65Q9H3J6 166 aaKnown RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 CXorf21Q9HAI6 301 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 EML4Q9HC35 981 aaKnown RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 SSU72Q9NP77 194 aaKnown RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 ERVK-11Q9UQG0 969 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 ERVK-19Q9WJR5 959 aa11.76□□□□□ -0.53
GGPS1-203ENST00000391855 WBP11Q9Y2W2 641 aaKnown RBP11.76□□□□□ -0.53
GGPS1-203ENST00000391855 MYO18BQ8IUG5 2567 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 NPIPB8E9PQR5 432 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 KLRC4-KLRK1H3BQV0 150 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 WWP2O00308 870 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 AZIN1O14977 448 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 OR2J2O76002 312 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 AGFG2O95081 481 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ATP1B1P05026 303 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 NUDT7P0C024 238 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 MYZAPP0CAP1 466 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 CHN1P15882 459 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 XKP51811 444 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 FOXA1P55317 472 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 HMGCS1Q01581 520 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ALDH6A1Q02252 535 aaKnown RBP11.75□□□□□ -0.53
GGPS1-203ENST00000391855 RBPJQ06330 500 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF763Q0D2J5 394 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF267Q14586 743 aaPredicted RBP11.75□□□□□ -0.53
GGPS1-203ENST00000391855 MAPKAPK3Q16644 382 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.75□□□□□ -0.53
GGPS1-203ENST00000391855 EIF2S3LQ2VIR3 472 aaKnown RBP11.75□□□□□ -0.53
GGPS1-203ENST00000391855 RTL4Q6ZR62 310 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF227Q86WZ6 799 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 C9orf40Q8IXQ3 194 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF321PQ8N8H1 164 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 GOLM1Q8NBJ4 401 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 OR7G1Q8NGA0 311 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 PRR7Q8TB68 274 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 KLHL29Q96CT2 875 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 C11orf24Q96F05 449 aaPredicted RBP11.75□□□□□ -0.53
GGPS1-203ENST00000391855 APIPQ96GX9 242 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 HES7Q9BYE0 225 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 GIMAP4Q9NUV9 329 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 EHD3Q9NZN3 535 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 CES1P1Q9UKY3 287 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 CFL2Q9Y281 166 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF780BQ9Y6R6 833 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 ESPL1Q14674 2120 aa11.75□□□□□ -0.53
GGPS1-203ENST00000391855 SLC28A1O00337 649 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 CTIFO43310 598 aaKnown RBP11.74□□□□□ -0.53
GGPS1-203ENST00000391855 TYROBPO43914 113 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 SPAG7O75391 227 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 ERAL1O75616 437 aaKnown RBP11.74□□□□□ -0.53
GGPS1-203ENST00000391855 ZIC2O95409 532 aaPredicted RBP11.74□□□□□ -0.53
GGPS1-203ENST00000391855 ZNF24P17028 368 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 NT5EP21589 574 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 PRPH2P23942 346 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 ALDH3A1P30838 453 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 ALDH9A1P49189 494 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 PER3P56645 1201 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 SLC37A1P57057 533 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 RAE1P78406 368 aaKnown RBP11.74□□□□□ -0.53
GGPS1-203ENST00000391855 PMP22Q01453 160 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 FUT7Q11130 342 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 EBPQ15125 230 aaKnown RBP11.74□□□□□ -0.53
GGPS1-203ENST00000391855 KRTCAP3Q53RY4 240 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 PIGGQ5H8A4 983 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 SPDYAQ5MJ70 313 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 LRIG3Q6UXM1 1119 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 GFRALQ6UXV0 394 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 BNC2Q6ZN30 1099 aaPredicted RBP11.74□□□□□ -0.53
GGPS1-203ENST00000391855 DGAT2L6Q6ZPD8 337 aa11.74□□□□□ -0.53
GGPS1-203ENST00000391855 LRRC25Q8N386 305 aaPredicted RBP11.74□□□□□ -0.53
GGPS1-203ENST00000391855 PSD4Q8NDX1 1056 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms