RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.51□□□□□ -1.37
RNU1-56P-201ENST00000391303 C2orf92A0A1B0GVN3 265 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 ESYT3A0FGR9 886 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 CCDC151A5D8V7 595 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 OR7A17O14581 309 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 TMPRSS11DO60235 418 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 CDC40O60508 579 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 EEDO75530 441 aaKnown RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 NADKO95544 446 aaPredicted RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 AIFM1O95831 613 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 KRT6AP02538 564 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 KRT6BP04259 564 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 ATP1B1P05026 303 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 RPS17P08708 135 aaKnown RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 PRF1P14222 555 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 TAC1P20366 129 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 PIK3R1P27986 724 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 GRNP28799 593 aaKnown RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 KRT6CP48668 564 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 MAN2A2P49641 1150 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 DCAF7P61962 342 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 KCNJ2P63252 427 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 HSF1Q00613 529 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 IRF9Q00978 393 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 SLC7A5Q01650 507 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 ASPHQ12797 758 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 MAP4K2Q12851 820 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 TRAF3Q13114 568 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 EBPQ15125 230 aaKnown RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 RPS6KA2Q15349 733 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 UAP1Q16222 522 aaPredicted RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 SLC25A35Q3KQZ1 300 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 HLA-DQA1Q5Y7H0 255 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 C18orf63Q68DL7 685 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 TTC19Q6DKK2 380 aaPredicted RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 LYPD8Q6UX82 237 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 B3GNT6Q6ZMB0 384 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 TRMT10CQ7L0Y3 403 aaKnown RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 MILR1Q7Z6M3 343 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 GALNT12Q8IXK2 581 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 METTL4Q8N3J2 472 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 GBP7Q8N8V2 638 aaPredicted RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 ZNF441Q8N8Z8 693 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 EIF1ADQ8N9N8 165 aaKnown RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 OR4K14Q8NGD5 310 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 OR52N2Q8NGI0 321 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 ACMSDQ8TDX5 336 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 CCDC126Q96EE4 140 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 LURAP1Q96LR2 239 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 CNPPD1Q9BV87 410 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 FAIM2Q9BWQ8 316 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 WWTR1Q9GZV5 400 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 ZNF703Q9H7S9 590 aaPredicted RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 NOL11Q9H8H0 719 aaKnown RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 PPCSQ9HAB8 311 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 MCCC2Q9HCC0 563 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 XPR1Q9UBH6 696 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 KCNN3Q9UGI6 736 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 TRPS1Q9UHF7 1281 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 WBP11Q9Y2W2 641 aaKnown RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 RNF11Q9Y3C5 154 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 CHCHD2Q9Y6H1 151 aaPredicted RBP6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 ICE1Q9Y2F5 2266 aa6.5□□□□□ -1.37
RNU1-56P-201ENST00000391303 NUP210LQ5VU65 1888 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 HIVEP3Q5T1R4 2406 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 TRGV5A0A0B4J1U4 118 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 AHRRA9YTQ3 701 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 SAP18O00422 153 aaKnown RBP6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 ACOX3O15254 700 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 ABCB7O75027 752 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 BCAS2O75934 225 aaPredicted RBP6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 SLITRK5O94991 958 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 SIX3O95343 332 aaPredicted RBP6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 ACSL3O95573 720 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 GSTA1P08263 222 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 RHOXF2BP0C7M4 288 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 CCL3P10147 92 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 CPMP14384 443 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 DRD2P14416 443 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 PORP16435 677 aaPredicted RBP6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 CSNK2A2P19784 350 aaPredicted RBP6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 MSX1P28360 303 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 MAGEA5P43359 124 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 KIR3DL1P43629 444 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 ZFP36L2P47974 494 aaKnown RBP6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 XKP51811 444 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 MAPK12P53778 367 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 HERVK_113P63132 956 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 ERVK-8P63133 956 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 ID2Q02363 134 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 CSTF3Q12996 717 aaKnown RBP6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 SNTA1Q13424 505 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 ZNF267Q14586 743 aaPredicted RBP6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 RASA2Q15283 850 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 ZNF750Q32MQ0 723 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 EMC4Q5J8M3 183 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 CCNYL2Q5T2Q4 361 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 RIPPLY2Q5TAB7 128 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 TMEM198Q66K66 360 aa6.49□□□□□ -1.37
RNU1-56P-201ENST00000391303 SLC48A1Q6P1K1 146 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms