RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 OR2AG1Q9H205 316 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 S1PR5Q9H228 398 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 EXOSC4Q9NPD3 245 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 FZD3Q9NPG1 666 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 GIMAP4Q9NUV9 329 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 RLIMQ9NVW2 624 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 CLEC1BQ9P126 229 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 VPS29Q9UBQ0 182 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 VPS4AQ9UN37 437 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 SLC22A14Q9Y267 594 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 LSM2Q9Y333 95 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 BOLA1Q9Y3E2 137 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 ZNF451Q9Y4E5 1061 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 SCAMP2O15127 329 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 LILRB5O75023 590 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 ZNF780AO75290 641 aaPredicted RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 CYP7B1O75881 506 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 CPSF4O95639 269 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 JUPP14923 745 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 HTR2BP41595 481 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 CRYBB2P43320 205 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 LIMS1P48059 325 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 SNRPGP62308 76 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 TARDBPQ13148 414 aaKnown RBP eCLIP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 C1DQ13901 141 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 LARS2Q15031 903 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 NCF4Q15080 339 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 QPRTQ15274 297 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 SPHARQ15513 63 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 EXOC3L2Q2M3D2 409 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 PIP5KL1Q5T9C9 394 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 CPTPQ5TA50 214 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 LIPJQ5W064 366 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 FAM131AQ6UXB0 335 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 RFPL4BQ6ZWI9 263 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 CREB3L2Q70SY1 520 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 UTS2BQ765I0 119 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 TRAPPC5Q8IUR0 188 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 FAM109AQ8N4B1 249 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 LILRA3Q8N6C8 439 aaPredicted RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 GEMIN6Q8WXD5 167 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 KLHL6Q8WZ60 621 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 AP3S1Q92572 193 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 CXorf40BQ96DE9 158 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 ZC3HAV1LQ96H79 300 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 MSLNLQ96KJ4 702 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 FYTTD1Q96QD9 318 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 PIP5K1AQ99755 562 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 MKRN2Q9H000 416 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 NUFIP1Q9UHK0 495 aaKnown RBP8.5□□□□□ -1.05
GPNMB-202ENST00000381990 SSR3Q9UNL2 185 aa8.5□□□□□ -1.05
GPNMB-202ENST00000381990 CKAP5Q14008 2032 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 H3BM21 787 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 ERVH48-1M5A8F1 160 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 NPC1O15118 1278 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 VEGFDO43915 354 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 ICMTO60725 284 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 C1QBP02746 253 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 HSD3B1P14060 373 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 CBLP22681 906 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 ITPKAP23677 461 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 HSD3B2P26439 372 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 PBLDP30039 288 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-202ENST00000381990 GZMKP49863 264 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 PFN3P60673 137 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 MLLT11Q13015 90 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-202ENST00000381990 TP53BP2Q13625 1128 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 ZMAT1Q5H9K5 638 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 CEP78Q5JTW2 689 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 WDR45BQ5MNZ6 344 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 DDI2Q5TDH0 399 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 KLHDC8AQ8IYD2 350 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 ELMOD2Q8IZ81 293 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 CLECL1Q8IZS7 167 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 CADM2Q8N3J6 435 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 MARVELD3Q96A59 401 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 TMEM80Q96HE8 168 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 LINC00615Q96LM1 132 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-202ENST00000381990 DHRS9Q9BPW9 319 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 RPP25Q9BUL9 199 aaKnown RBP8.49□□□□□ -1.05
GPNMB-202ENST00000381990 ATG10Q9H0Y0 220 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 RSPH9Q9H1X1 276 aaPredicted RBP8.49□□□□□ -1.05
GPNMB-202ENST00000381990 MMP28Q9H239 520 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 SLC25A19Q9HC21 320 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 TOR4AQ9NXH8 423 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 TAS2R16Q9NYV7 291 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 GULP1Q9UBP9 304 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 FTSJ1Q9UET6 329 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 NDOR1Q9UHB4 597 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 C17orf113A0A1B0GUU1 675 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 FABP12A6NFH5 140 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 RNASET2O00584 256 aaKnown RBP8.49□□□□□ -1.05
GPNMB-202ENST00000381990 C1QCP02747 245 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 CSF3P09919 207 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 NUDT7P0C024 238 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 LAMP1P11279 417 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 PDHA2P29803 388 aa8.49□□□□□ -1.05
GPNMB-202ENST00000381990 AQP1P29972 269 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms