RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ZNF300Q96RE9 604 aaPredicted RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 BARD1Q99728 777 aaKnown RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 C17orf62Q9BQA9 187 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 TTYH2Q9BSA4 534 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 AICDAQ9GZX7 198 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 C8orf33Q9H7E9 229 aaPredicted RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 SLAMF7Q9NQ25 335 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 KCNJ13O60928 360 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 GCM2O75603 506 aaPredicted RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 OPN1SWP03999 348 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 SEMG1P04279 462 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 FABP3P05413 133 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 KIAA1024LP59773 190 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 NFATC4Q14934 902 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 CDK10Q15131 360 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 NUDT13Q86X67 352 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 GALNT12Q8IXK2 581 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 CADM2Q8N3J6 435 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 NATD1Q8N6N6 113 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 LSM14AQ8ND56 463 aaKnown RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 OR52N2Q8NGI0 321 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 CREB3L4Q8TEY5 395 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 UCN3Q969E3 161 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 RGMAQ96B86 450 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 DEPDC7Q96QD5 511 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 RBM4BQ9BQ04 359 aaKnown RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 RBM4Q9BWF3 364 aaKnown RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 ASPSCR1Q9BZE9 553 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 C6orf62Q9GZU0 229 aaPredicted RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 TMEM168Q9H0V1 697 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 NECTIN3Q9NQS3 549 aa13.53□□□□□ -0.24
CLCN4-201ENST00000380829 TEX10Q9NXF1 929 aaPredicted RBP13.53□□□□□ -0.24
CLCN4-201ENST00000380829 HAT1O14929 419 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 TNFRSF21O75509 655 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 HPRP00739 348 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 GABRG2P18507 467 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 PCGF2P35227 344 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 KCNAB2Q13303 367 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 ELMOD2Q8IZ81 293 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 OR2L3Q8NG85 312 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 OR4E2Q8NGC2 313 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 RORBQ92753 470 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 PROX1Q92786 737 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 POP5Q969H6 163 aaKnown RBP13.52□□□□□ -0.24
CLCN4-201ENST00000380829 EXOSC8Q96B26 276 aaKnown RBP13.52□□□□□ -0.24
CLCN4-201ENST00000380829 WDR92Q96MX6 357 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 TEFMQ96QE5 360 aaKnown RBP13.52□□□□□ -0.24
CLCN4-201ENST00000380829 CITED4Q96RK1 184 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 DPH7Q9BTV6 452 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 KLHL31Q9H511 634 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 CXorf36Q9H7Y0 433 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 ZBTB20Q9HC78 741 aaPredicted RBP13.52□□□□□ -0.24
CLCN4-201ENST00000380829 ERVK-18Q9QC07 812 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 RABL2BQ9UNT1 228 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 SNX11Q9Y5W9 270 aa13.52□□□□□ -0.24
CLCN4-201ENST00000380829 SNRNP200O75643 2136 aaKnown RBP13.52□□□□□ -0.24
CLCN4-201ENST00000380829 SHISA7A6NL88 538 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 RASGRP1O95267 797 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 ALOX12P18054 663 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 HNRNPA2B1P22626 353 aaKnown RBP13.52□□□□□ -0.25
CLCN4-201ENST00000380829 ACTR1BP42025 376 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 ACTR1AP61163 376 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 LRRC32Q14392 662 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 ZFP69Q49AA0 526 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 GCNT6Q5T4J0 391 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 AGAP6Q5VW22 663 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 NXNL2Q5VZ03 156 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 OR2T5Q6IEZ7 315 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 LINC00299Q6ZSB3 139 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 CEP68Q76N32 757 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 GDPD3Q7L5L3 318 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 SVOPQ8N4V2 548 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 OR2T29Q8NH02 315 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 NFKBIDQ8NI38 313 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 AGAP4Q96P64 663 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 PITHD1Q9GZP4 211 aaPredicted RBP13.52□□□□□ -0.25
CLCN4-201ENST00000380829 SYNPO2LQ9H987 977 aa13.52□□□□□ -0.25
CLCN4-201ENST00000380829 PAQR5Q9NXK6 330 aaPredicted RBP13.52□□□□□ -0.25
CLCN4-201ENST00000380829 NDRG2Q9UN36 371 aaKnown RBP13.52□□□□□ -0.25
CLCN4-201ENST00000380829 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.52□□□□□ -0.25
CLCN4-201ENST00000380829 ISPDA4D126 451 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 LRIT2A6NDA9 550 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 SUV39H1O43463 412 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 PRICKLE3O43900 615 aaPredicted RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 FADS2O95864 444 aaKnown RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 SSR2P43308 183 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 PRIM2P49643 509 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 RPS26P62854 115 aaKnown RBP13.51□□□□□ -0.25
CLCN4-201ENST00000380829 GPLD1P80108 840 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 HSPB3Q12988 150 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 HEPACAMQ14CZ8 416 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 ZNF181Q2M3W8 571 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 EOGTQ5NDL2 527 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 ZNF793Q6ZN11 406 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 TRIM69Q86WT6 500 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 IL17RDQ8NFM7 739 aa13.51□□□□□ -0.25
CLCN4-201ENST00000380829 ASB12Q8WXK4 309 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms