RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 IFNA2P01563 188 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 CRYGSP22914 178 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 GSTM2P28161 218 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 RPL21P46778 160 aaKnown RBP15.79■□□□□ 0.12
HMGN1-203ENST00000380748 MASP1P48740 699 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 FBXW4P57775 412 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 IGLV3-21P80748 117 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-203ENST00000380748 TNK1Q13470 666 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 HEPHL1Q6MZM0 1159 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 UBE3DQ7Z6J8 389 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 KRT78Q8N1N4 520 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 IGFBPL1Q8WX77 278 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 FBXL20Q96IG2 436 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 ZFP3Q96NJ6 502 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 TM9SF2Q99805 663 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 XAB2Q9HCS7 855 aaKnown RBP15.79■□□□□ 0.12
HMGN1-203ENST00000380748 ZNF226Q9NYT6 803 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 SLC17A6Q9P2U8 582 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 PACSIN3Q9UKS6 424 aa15.79■□□□□ 0.12
HMGN1-203ENST00000380748 CDC7O00311 574 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 F12P00748 615 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-203ENST00000380748 AHSGP02765 367 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 CCDC175P0C221 793 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 DIO3P55073 304 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 HERVK_113P63132 956 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 ERVK-8P63133 956 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 EBPQ15125 230 aaKnown RBP15.78■□□□□ 0.12
HMGN1-203ENST00000380748 RPS6KA2Q15349 733 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 SLC29A4Q7RTT9 530 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 ADGRE4PQ86SQ3 457 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 YRDCQ86U90 279 aaKnown RBP15.78■□□□□ 0.12
HMGN1-203ENST00000380748 FAM83FQ8NEG4 500 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-203ENST00000380748 SPPL2AQ8TCT8 520 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 ART5Q96L15 291 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 MARK4Q96L34 752 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 SIGLEC10Q96LC7 697 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 EGFL8Q99944 293 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 MED18Q9BUE0 208 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 ERVK-6Q9BXR3 956 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 ANGPTL4Q9BY76 406 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 NT5DC2Q9H857 520 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 TEX10Q9NXF1 929 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-203ENST00000380748 ADGRE2Q9UHX3 823 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 ERVK-19Q9WJR5 959 aa15.78■□□□□ 0.12
HMGN1-203ENST00000380748 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 NPEPPSL1A6NEC2 478 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 H0Y3Z8 333 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 RTCAO00442 366 aaKnown RBP15.77■□□□□ 0.12
HMGN1-203ENST00000380748 GNB5O14775 395 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 DYRK3O43781 588 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 PRAMEF4O60810 478 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 TNFSF13O75888 250 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 SNX4O95219 450 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 CPN2P22792 545 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 ATP5A1P25705 553 aaKnown RBP15.77■□□□□ 0.12
HMGN1-203ENST00000380748 LOXP28300 417 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-203ENST00000380748 CCKARP32238 428 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 HPDP32754 393 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-203ENST00000380748 MAGEA3P43357 314 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 KCNC1P48547 511 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 SRYQ05066 204 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 C10orf62Q5T681 223 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-203ENST00000380748 PRAMEF9Q5VWM5 478 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 PACS2Q86VP3 889 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 MEIOBQ8N635 442 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 ACOT4Q8N9L9 421 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 MCUQ8NE86 351 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 KCNC2Q96PR1 638 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 G6PC3Q9BUM1 346 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.77■□□□□ 0.12
HMGN1-203ENST00000380748 ZNF490Q9ULM2 529 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-203ENST00000380748 ZKSCAN5Q9Y2L8 839 aa15.77■□□□□ 0.12
HMGN1-203ENST00000380748 A0A087X1B8 175 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 IQANK1A0A1B0GTG1 560 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 RNF223E7ERA6 249 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 TP53I11O14683 189 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 PHF1O43189 567 aaPredicted RBP15.76■□□□□ 0.11
HMGN1-203ENST00000380748 SOX30O94993 753 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 ACTL6AO96019 429 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 FGGP02679 453 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 CPN1P15169 458 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 PAX1P15863 534 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 PTPN6P29350 595 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 SLC6A12P48065 614 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 SLC37A1P57057 533 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 PLIN5Q00G26 463 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 TGM3Q08188 693 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 CRYMQ14894 314 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 RNF111Q6ZNA4 994 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 PLEKHM3Q6ZWE6 761 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 ZNF550Q7Z398 422 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 WNT2BQ93097 391 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 RBM18Q96H35 190 aaKnown RBP15.76■□□□□ 0.11
HMGN1-203ENST00000380748 CLCF1Q9UBD9 225 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 SPACA6W5XKT8 324 aa15.76■□□□□ 0.11
HMGN1-203ENST00000380748 CR1P17927 2039 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 EXPH5Q8NEV8 1989 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 A0A1W2PNV4 684 aa15.75■□□□□ 0.11
HMGN1-203ENST00000380748 MSTNO14793 375 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms