RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 FAM20CQ8IXL6 584 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 SLC5A8Q8N695 610 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 SMYD1Q8NB12 490 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 PHF10Q8WUB8 498 aaKnown RBP21.85■■□□□ 1.09
VPS16-201ENST00000380443 ZNF354BQ96LW1 612 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 BCL7BQ9BQE9 202 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 ATG4BQ9Y4P1 393 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 H3BMQ9 156 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 PPM1DO15297 605 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 AIFM1O95831 613 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 FHP07954 510 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 SLC35G6P0C7Q6 338 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 TNFRSF1BP20333 461 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 PRR5P85299 388 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 DUSP7Q16829 419 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 COLEC12Q5KU26 742 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 TPRG1LQ5T0D9 272 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 NRROSQ86YC3 692 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 FAM3CQ92520 227 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 COG8Q96MW5 612 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 OR51I1Q9H343 314 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 PLCXD1Q9NUJ7 323 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 CA5BQ9Y2D0 317 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 GPC6Q9Y625 555 aaPredicted RBP21.84■■□□□ 1.09
VPS16-201ENST00000380443 A0A0C4DFX4 3053 aa21.84■■□□□ 1.09
VPS16-201ENST00000380443 PTGES3LE9PB15 166 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 SLC28A2O43868 658 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 OXSR1O95747 527 aaPredicted RBP21.83■■□□□ 1.09
VPS16-201ENST00000380443 PCMT1P22061 227 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 CRISP3P54108 245 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 RPS26P62854 115 aaKnown RBP21.83■■□□□ 1.09
VPS16-201ENST00000380443 PRRT3Q5FWE3 981 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 Q6ZSR6 202 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 TRIM48Q8IWZ4 208 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 FLVCR1-AS1Q8TAF5 88 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 FAM174AQ8TBP5 190 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 TM4SF19Q96DZ7 209 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 LHPPQ9H008 270 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 GPN2Q9H9Y4 310 aaPredicted RBP21.83■■□□□ 1.09
VPS16-201ENST00000380443 C3orf14Q9HBI5 128 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 POT1Q9NUX5 634 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 PHF11Q9UIL8 331 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 PCDHGA6Q9Y5G7 932 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 VCANP13611 3396 aa21.83■■□□□ 1.09
VPS16-201ENST00000380443 C4orf51C9J302 202 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 SCAMP1O15126 338 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 NDUFS2O75306 463 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 ZNF10P21506 573 aaPredicted RBP21.83■■□□□ 1.08
VPS16-201ENST00000380443 NPTX1Q15818 432 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 GPBAR1Q8TDU6 330 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 RAB8BQ92930 207 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 DTNBP1Q96EV8 351 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 DHRS1Q96LJ7 313 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 OR2A14Q96R47 310 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 MAPKAP1Q9BPZ7 522 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 BTBD2Q9BX70 525 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 GSDMCQ9BYG8 508 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 FBXW2Q9UKT8 454 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 SNX11Q9Y5W9 270 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 ZNF780BQ9Y6R6 833 aa21.83■■□□□ 1.08
VPS16-201ENST00000380443 C19orf67A6NJJ6 358 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 ZNF99A8MXY4 864 aaPredicted RBP21.82■■□□□ 1.08
VPS16-201ENST00000380443 PGRMC2O15173 223 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 EMC8O43402 210 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 ASNA1O43681 348 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 OR12D1P0DN82 309 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 NR2F1P10589 423 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 CERS1P27544 350 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 PUM1Q14671 1186 aaKnown RBP eCLIP21.82■■□□□ 1.08
VPS16-201ENST00000380443 SUZ12Q15022 739 aaKnown RBP21.82■■□□□ 1.08
VPS16-201ENST00000380443 MAPK11Q15759 364 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 KIAA0895LQ68EN5 471 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 VN1R4Q7Z5H5 301 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 TAGAPQ8N103 731 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 ALPK1Q96QP1 1244 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 SERHL2Q9H4I8 314 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 PAK1IP1Q9NWT1 392 aaPredicted RBP21.82■■□□□ 1.08
VPS16-201ENST00000380443 SEC14L3Q9UDX4 400 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 TMCC3Q9ULS5 477 aa21.82■■□□□ 1.08
VPS16-201ENST00000380443 KIR2DS5A0A0G2JLQ3 304 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 A0A0G2JNG1 304 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 KIR2DS3K7RE56 304 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 ERAL1O75616 437 aaKnown RBP21.81■■□□□ 1.08
VPS16-201ENST00000380443 RECKO95980 971 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 SMIM10L1P0DMW3 83 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 HOXB3P14651 431 aaPredicted RBP21.81■■□□□ 1.08
VPS16-201ENST00000380443 CCNA2P20248 432 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 CBLP22681 906 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 BUD31P41223 144 aaPredicted RBP21.81■■□□□ 1.08
VPS16-201ENST00000380443 DGKEP52429 567 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 KIR2DS5Q14953 304 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 PRSS48Q7RTY5 328 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 GJD3Q8N144 294 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 CAMKVQ8NCB2 501 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 GPR32P1Q8NGA4 272 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 CCL4L1Q8NHW4 92 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 UCN3Q969E3 161 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 CNRIP1Q96F85 164 aaPredicted RBP21.81■■□□□ 1.08
VPS16-201ENST00000380443 SMIM10Q96HG1 83 aa21.81■■□□□ 1.08
VPS16-201ENST00000380443 SERINC2Q96SA4 455 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms