RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 DET1Q7L5Y6 550 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 SLC29A4Q7RTT9 530 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 SKA3Q8IX90 412 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 TMEM151AQ8N4L1 468 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 ACVR1CQ8NER5 493 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 OR4Q3Q8NH05 313 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 OR6X1Q8NH79 312 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 TCEAL4Q96EI5 215 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 YIPF4Q9BSR8 244 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 HDHD2Q9H0R4 259 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 B3GAT2Q9NPZ5 323 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 A0A0A0MRY4 1105 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 MYO1GB0I1T2 1018 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 AP2A2O94973 939 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 CDRT1O95170 752 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 F2P00734 622 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 TPSB2P20231 275 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 CLCN3P51790 818 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 STARD6P59095 220 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 ELAVL2Q12926 359 aaKnown RBP8.93□□□□□ -0.98
PTPRA-204ENST00000380393 MXD4Q14582 209 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-204ENST00000380393 P2RY14Q15391 338 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 TPSAB1Q15661 275 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 PAGE3Q5JUK9 113 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 MBOAT1Q6ZNC8 495 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 C15orf39Q6ZRI6 1047 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 MSANTD1Q6ZTZ1 278 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 LRRTM4Q86VH4 590 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF561Q8N587 486 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 GGHQ92820 318 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 SCMH1Q96GD3 660 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 MARS2Q96GW9 593 aaKnown RBP8.93□□□□□ -0.98
PTPRA-204ENST00000380393 MS4A4EQ96PG1 132 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 HHIPQ96QV1 700 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 TCF25Q9BQ70 676 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 PIGQQ9BRB3 760 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 LRRC3Q9BY71 257 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 CHIAQ9BZP6 476 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 METTL17Q9H7H0 456 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-204ENST00000380393 EML4Q9HC35 981 aaKnown RBP8.93□□□□□ -0.98
PTPRA-204ENST00000380393 ASCL3Q9NQ33 180 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 SIRT7Q9NRC8 400 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 SPASTQ9UBP0 616 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 SEMA7AO75326 666 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 ICAM1P05362 532 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 NQO2P16083 231 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 HEPHL1Q6MZM0 1159 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 RNF113BQ8IZP6 322 aaKnown RBP8.93□□□□□ -0.98
PTPRA-204ENST00000380393 LRRC18Q8N456 261 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 APH1BQ8WW43 257 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 COL26A1Q96A83 441 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 PIWIL1Q96J94 861 aaKnown RBP8.93□□□□□ -0.98
PTPRA-204ENST00000380393 OR2M2Q96R28 347 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 ATG101Q9BSB4 218 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 PRR14Q9BWN1 585 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 NIF3L1Q9GZT8 377 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 TOLLIPQ9H0E2 274 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 AKTIPQ9H8T0 292 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 RNF146Q9NTX7 359 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 DZANK1Q9NVP4 752 aa8.93□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF214Q9UL59 606 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-204ENST00000380393 CLCA1A8K7I4 914 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 H0YCG3 227 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 LSM8O95777 96 aaKnown RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 CXCL2P19875 107 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 PAX6P26367 422 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 GDI1P31150 447 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 GTF2H3Q13889 308 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ARHGAP40Q5TG30 622 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 CNIH2Q6PI25 160 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 C4orf19Q8IY42 314 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 PCDH19Q8TAB3 1148 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF461Q8TAF7 563 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 CHFRQ96EP1 664 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 HAPLN2Q9GZV7 340 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ST6GALNAC4Q9H4F1 302 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 KCNK12Q9HB15 430 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 LHX6Q9UPM6 363 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 YARS2Q9Y2Z4 477 aaKnown RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 PCDHB7Q9Y5E2 793 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 A0A1W2PPE3 182 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ADAMDEC1O15204 470 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 FOSL2P15408 326 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF25P17030 456 aaPredicted RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 NPR2P20594 1047 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 GPD1P21695 349 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 OMPP47874 163 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 PLK1P53350 603 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ST3GAL4Q11206 333 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 GPR176Q14439 515 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 TAZQ16635 292 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 GCNT6Q5T4J0 391 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 MSANTD2Q6P1R3 559 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 CFAP161Q6P656 301 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ZC3H14Q6PJT7 736 aaKnown RBP8.92□□□□□ -0.98
PTPRA-204ENST00000380393 LCLAT1Q6UWP7 414 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ASB18Q6ZVZ8 466 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 ZNF367Q7RTV3 350 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 FJX1Q86VR8 437 aa8.92□□□□□ -0.98
PTPRA-204ENST00000380393 XYLT1Q86Y38 959 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms