RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 CSF2RBP32927 897 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 GNALP38405 381 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 CSRP3P50461 194 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 DGKEP52429 567 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 HTRA4P83105 476 aaPredicted RBP8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 MAPKAPK3Q16644 382 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 GFOD2Q3B7J2 385 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 AARDQ4LEZ3 155 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 MARCH8Q5T0T0 291 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 GSG1LQ6UXU4 331 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF730Q6ZMV8 503 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 REC114Q7Z4M0 266 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 CFAP206Q8IYR0 622 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 SYNPOQ8N3V7 929 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 OR5T3Q8NGG3 340 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 SLC22A18Q96BI1 424 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 PIGQQ9BRB3 760 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 KATNB1Q9BVA0 655 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 CDCA4Q9BXL8 241 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 GFOD1Q9NXC2 390 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 MGAT4CQ9UBM8 478 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 FKBPLQ9UIM3 349 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 NUBP2Q9Y5Y2 271 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 RNF215Q9Y6U7 377 aa8.12□□□□□ -1.11
NHLRC3-201ENST00000379599 EP400Q96L91 3159 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 MCRIP1C9JLW8 97 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 KCNQ2O43526 872 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 PRAMEF2O60811 474 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 GLP2RO95838 553 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 HPP00738 406 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 HPXP02790 462 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 HCKP08631 526 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 HOXB8P17481 243 aaPredicted RBP8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 AKAP5P24588 427 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 CRKP46108 304 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 BDKRB1P46663 353 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ZP1P60852 638 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 UBE2IP63279 158 aaKnown RBP8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 CAP1Q01518 475 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ILKQ13418 452 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 C1DQ13901 141 aaKnown RBP8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF699Q32M78 642 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 C3orf38Q5JPI3 329 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 KIAA1211LQ6NV74 962 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 TMUB2Q71RG4 321 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 KDELC2Q7Z4H8 507 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 TP53INP2Q8IXH6 220 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 OR5M9Q8NGP3 310 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 TPD52L3Q96J77 140 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 FEVQ99581 238 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 C1orf109Q9NX04 203 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ZIM2Q9NZV7 527 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 FBXL21Q9UKT6 434 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 UBQLN1Q9UMX0 589 aaKnown RBP8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 PPEF2O14830 753 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 IGF2P01344 180 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ANKRD34CP0C6C1 535 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 G6PDP11413 515 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 GABRA1P14867 456 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 NFYBP25208 207 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 AKT1P31749 480 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 VLDLRP98155 873 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 DGKZQ13574 1117 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 PEA15Q15121 130 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 TRAM1Q15629 374 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 SPIN4Q56A73 249 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 DHRS7BQ6IAN0 325 aaPredicted RBP8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 H3F3CQ6NXT2 135 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF549Q6P9A3 640 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 PTCHD4Q6ZW05 846 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 FAM122BQ7Z309 247 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 DMBX1Q8NFW5 382 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 OR52J3Q8NH60 311 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 TM9SF4Q92544 642 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ARMC5Q96C12 935 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 IL4I1Q96RQ9 567 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 PRO1933Q9H354 126 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 KLHL1Q9NR64 748 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 CLN6Q9NWW5 311 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 COX16Q9P0S2 106 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 MBD1Q9UIS9 605 aaPredicted RBP8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 COL24A1Q17RW2 1714 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 DENND4AQ7Z401 1863 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 A0A1W2PPE3 182 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 G3V3Q6 166 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 M0QZ92 97 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 LRRTM2O43300 516 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 CSO75390 466 aaKnown RBP8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 PEX11BO96011 259 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 SLURP2P0DP57 97 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 PPP3CBP16298 524 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 NPR2P20594 1047 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ITGB7P26010 798 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF155Q12901 538 aaPredicted RBP8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 HTR4Q13639 388 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF789Q5FWF6 425 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 C6orf136Q5SQH8 315 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 MLIPQ5VWP3 458 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 OVOS1Q6IE37 1185 aa8.11□□□□□ -1.11
NHLRC3-201ENST00000379599 USP30Q70CQ3 517 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms