RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 UBE2FQ969M7 185 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 CAMK1GQ96NX5 476 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 TCEAL2Q9H3H9 227 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-201ENST00000379433 REEP4Q9H6H4 257 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 MRPS30Q9NP92 439 aaKnown RBP10.27□□□□□ -0.77
NEDD9-201ENST00000379433 POLE3Q9NRF9 147 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 PDP1Q9P0J1 537 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-201ENST00000379433 NCKAP1Q9Y2A7 1128 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 ASCC3Q8N3C0 2202 aaKnown RBP10.27□□□□□ -0.77
NEDD9-201ENST00000379433 ARID1BQ8NFD5 2236 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-201ENST00000379433 J3KTA2 159 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 H6PDO95479 791 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 TYRP1P17643 537 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 EPHA2P29317 976 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 KDELR2P33947 212 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 TTKP33981 857 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 RFX3P48380 749 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 CCR8P51685 355 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 IL5RAQ01344 420 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 DSG2Q14126 1118 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 TRIM48Q8IWZ4 208 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 OR4N5Q8IXE1 308 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 EID3Q8N140 333 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 OR5D16Q8NGK9 328 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 VANGL1Q8TAA9 524 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-201ENST00000379433 XAGE5Q8WWM1 108 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 TESCQ96BS2 214 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 PYURFQ96I23 114 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 COX14Q96I36 57 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 ART5Q96L15 291 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 CEP19Q96LK0 163 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 SGPP1Q9BX95 441 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 DGCR6LQ9BY27 220 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 ASPSCR1Q9BZE9 553 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 MIR1-1HGQ9H1L0 117 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 DCAF13Q9NV06 445 aaKnown RBP10.27□□□□□ -0.77
NEDD9-201ENST00000379433 CA14Q9ULX7 337 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 SLCO1B1Q9Y6L6 691 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 LINC01387J3KSC0 135 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 M0R129 80 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 SCN2BO60939 215 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 RASAL1O95294 804 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 THRBP10828 461 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 AGXTP21549 392 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ABHD18Q0P651 414 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 CCDC58Q4VC31 144 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 CYBRD1Q53TN4 286 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 CMPK2Q5EBM0 449 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ATG9BQ674R7 924 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ADAMTSL4Q6UY14 1074 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 SMPDL3AQ92484 453 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 CXorf40BQ96DE9 158 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ARSGQ96EG1 525 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 REXO5Q96IC2 774 aaKnown RBP10.26□□□□□ -0.77
NEDD9-201ENST00000379433 TM9SF2Q99805 663 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 CHCHD6Q9BRQ6 235 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ARMC7Q9H6L4 198 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 NEUROD4Q9HD90 331 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 STARD5Q9NSY2 213 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ZFP57Q9NU63 452 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 FAIMQ9NVQ4 179 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ENOPH1Q9UHY7 261 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 NUDT19A8MXV4 375 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 TMPRSS11DO60235 418 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 GOSR1O95249 250 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 POU1F1P28069 291 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 SLC9A3P48764 834 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 TPMTP51580 245 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 C19orf57Q0VDD7 668 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 KCNAB2Q13303 367 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ODF1Q14990 250 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 RGNQ15493 299 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 MPEG1Q2M385 716 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 USP43Q70EL4 1123 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 TP53I13Q8NBR0 393 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-201ENST00000379433 OR8K3Q8NH51 312 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 ZFP28Q8NHY6 868 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 CNIH3Q8TBE1 160 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 HHIPQ96QV1 700 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 CYB5R1Q9UHQ9 305 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 PCDHB11Q9Y5F2 797 aa10.26□□□□□ -0.77
NEDD9-201ENST00000379433 PRSS38A1L453 326 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 B8ZZF3 427 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 XPNPEP2O43895 674 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 SCELO95171 688 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CAPNS1P04632 268 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 RPN2P04844 631 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CELA2BP08218 269 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 UMPSP11172 480 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 ATF4P18848 351 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 SHMT2P34897 504 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 RPL5P46777 297 aaKnown RBP10.25□□□□□ -0.77
NEDD9-201ENST00000379433 SCRN3Q0VDG4 424 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 LSAMPQ13449 338 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 LRIT3Q3SXY7 679 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 RHOUQ7L0Q8 258 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 CARM1Q86X55 608 aa10.25□□□□□ -0.77
NEDD9-201ENST00000379433 PTOV1Q86YD1 416 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms