RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CMTM7Q96FZ5 175 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 CASD1Q96PB1 797 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 DNAJB9Q9UBS3 223 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 F7P08709 466 aaPredicted RBP12.76□□□□□ -0.37
HIPK3-202ENST00000379016 CREB1P16220 341 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 SERPINF1P36955 418 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 CSKP41240 450 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 FLT3LGP49771 235 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 HMGCS1Q01581 520 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 GALNT1Q10472 559 aaPredicted RBP12.76□□□□□ -0.37
HIPK3-202ENST00000379016 MELKQ14680 651 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 GDPD4Q6W3E5 623 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 GLIS3Q8NEA6 775 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
HIPK3-202ENST00000379016 ZDHHC3Q9NYG2 299 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 TAS2R9Q9NYW1 312 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 PLLPQ9Y342 182 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 K7EPI3 171 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 SEC14L2O76054 403 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 THBS3P49746 956 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 TAS2R43P59537 309 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 FGL2Q14314 439 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 KCTD18Q6PI47 426 aaPredicted RBP12.76□□□□□ -0.37
HIPK3-202ENST00000379016 UGT2A3Q6UWM9 527 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 HPSE2Q8WWQ2 592 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 FOXRED1Q96CU9 486 aaPredicted RBP12.76□□□□□ -0.37
HIPK3-202ENST00000379016 PTCHD1Q96NR3 888 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 KCNK6Q9Y257 313 aa12.76□□□□□ -0.37
HIPK3-202ENST00000379016 EI24O14681 340 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 TUSC2O75896 110 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 HLA-DPB1P04440 258 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 CD63P08962 238 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 CD72P21854 359 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 ARRB1P49407 418 aaPredicted RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 HNRNPFP52597 415 aaKnown RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 CAPSQ13938 189 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 FAM199XQ6PEV8 388 aaPredicted RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 PCDHAC1Q9H158 963 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 FAIMQ9NVQ4 179 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 MRPL22Q9NWU5 206 aaKnown RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 SALL1Q9NSC2 1324 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 SCGB1C2P0DMR2 95 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 ADRB3P13945 408 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 ZNF43P17038 809 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 SFTPDP35247 375 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 OR1E2P47887 323 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 PLAC9Q5JTB6 97 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 OR4F3Q6IEY1 312 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 MOB1BQ7L9L4 216 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 RNF32Q9H0A6 362 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 TCEAL2Q9H3H9 227 aaPredicted RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 C12orf65Q9H3J6 166 aaKnown RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 RFPL1O75677 317 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 HOXB2P14652 356 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 EVI2BP34910 448 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 LPAL2Q16609 132 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 AGAP7PQ5VUJ5 663 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 AGAP6Q5VW22 663 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 TMEM198Q66K66 360 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 ASRGL1Q7L266 308 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 YTHDF3Q7Z739 585 aaKnown RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 ZNF679Q8IYX0 411 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 ZNF461Q8TAF7 563 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 AGAP4Q96P64 663 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 PIGBOS1A0A0B4J2F0 54 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 ANXA8P13928 327 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 GABRA4P48169 554 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 LIPKQ5VXJ0 399 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 PSMG2Q969U7 264 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 RBMXL1Q96E39 390 aaKnown RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 F5H5K5 113 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 AQP7O14520 342 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 MMP20O60882 483 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 CTRB1P17538 263 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 PTTG1IPP53801 180 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 OR4D2P58180 307 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 LAPTM4AQ15012 233 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 CTRB2Q6GPI1 263 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 METTL2BQ6P1Q9 378 aaKnown RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 TMEM205Q6UW68 189 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 NEIL3Q8TAT5 605 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 FAM46BQ96A09 425 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 NMUR2Q9GZQ4 415 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 ZBTB20Q9HC78 741 aaPredicted RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 THUMPD1Q9NXG2 353 aaKnown RBP12.75□□□□□ -0.37
HIPK3-202ENST00000379016 CNTN6Q9UQ52 1028 aa12.75□□□□□ -0.37
HIPK3-202ENST00000379016 CBY3A6NI87 242 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 NUDT21O43809 227 aaKnown RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 MAKP20794 623 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 ETV4P43268 484 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 RAB5CP51148 216 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 COMMD7Q86VX2 200 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 OR9A4Q8NGU2 314 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 MOB1AQ9H8S9 216 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 ERVK-7P63135 1459 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms