RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 PDP1Q9P0J1 537 aaPredicted RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 PIM2Q9P1W9 311 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 MARCH4Q9P2E8 410 aaPredicted RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 SEC14L4Q9UDX3 406 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 AFF4Q9UHB7 1163 aaKnown RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 PRELID3BQ9Y3B1 194 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 U3KQV3 271 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 DSPPQ9NZW4 1301 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 EVPLQ92817 2033 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 ARRDC5A6NEK1 342 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 GSTA4O15217 222 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 SIAH2O43255 324 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 ACTL6BO94805 426 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 ESR1P03372 595 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 FABP3P05413 133 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 CTPS1P17812 591 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 OGNP20774 298 aaKnown RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC6A1P30531 599 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 CALCRP30988 508 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 GDI1P31150 447 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 HOXA1P49639 335 aaPredicted RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 HK3P52790 923 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 TPI1P60174 286 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 ERVPABLB-1P60509 514 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 ST3GAL4Q11206 333 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 NOGQ13253 232 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 TUSC3Q13454 348 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 IHHQ14623 411 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 HSD17B12Q53GQ0 312 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 PLA1AQ53H76 456 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 ALKAL1Q6UXT8 129 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 EIF3MQ7L2H7 374 aaKnown RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 TRIM46Q7Z4K8 759 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 RASAL3Q86YV0 1011 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 LINC00346Q8IVM7 164 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 LAS2Q8IYD9 372 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 MSANTD3Q96H12 275 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 FAM167AQ96KS9 214 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 SNX22Q96L94 193 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 WNT10AQ9GZT5 417 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 POLMQ9NP87 494 aaPredicted RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 B3GAT2Q9NPZ5 323 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 THUMPD1Q9NXG2 353 aaKnown RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 ATP6V1HQ9UI12 483 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 KCNK7Q9Y2U2 307 aa6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 TDRD15B5MCY1 1934 aaKnown RBP6.36□□□□□ -1.39
CDKAL1-202ENST00000378610 KIF26AQ9ULI4 1882 aaPredicted RBP6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 EFCAB10A6NFE3 127 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 OR6C65A6NJZ3 312 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 OR7A17O14581 309 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 SCAMP1O15126 338 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 C22orf31O95567 290 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 HLA-DQB2P05538 268 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 C1SP09871 688 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC2A3P11169 496 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ATF6P18850 670 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 CD40P25942 277 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 TPMTP51580 245 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ARHGDIAP52565 204 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 KCNJ10P78508 379 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 EXOSC2Q13868 293 aaKnown RBP6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 GNA13Q14344 377 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 SF3A2Q15428 464 aaKnown RBP6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 RFTN2Q52LD8 501 aaPredicted RBP6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 LCN1P1Q5VSP4 162 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 PLAG1Q6DJT9 500 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ANKRD54Q6NXT1 300 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 PAQR9Q6ZVX9 377 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 TRIM48Q8IWZ4 208 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 PM20D2Q8IYS1 436 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 FBXO39Q8N4B4 442 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 UXS1Q8NBZ7 420 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 B3GNT7Q8NFL0 401 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 NUDT8Q8WV74 236 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ELMO1Q92556 727 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 IMP4Q96G21 291 aaKnown RBP6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 NECTIN4Q96NY8 510 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC25A18Q9H1K4 315 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 NXF3Q9H4D5 531 aaKnown RBP6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 FOLH1BQ9HBA9 442 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ABCB9Q9NP78 766 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 SEMA4BQ9NPR2 832 aaPredicted RBP6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 IFT46Q9NQC8 304 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 RGS18Q9NS28 235 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 SLC39A1Q9NY26 324 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 EXTL2Q9UBQ6 330 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ZNF70Q9UC06 446 aaPredicted RBP6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 LIPT1Q9Y234 373 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ZNF281Q9Y2X9 895 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ASB1Q9Y576 335 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 CACNG2Q9Y698 323 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 POMT1Q9Y6A1 747 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 LOC285095A0A1B0GVY8 99 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 ZNF98A6NK75 572 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 MPTX1A8MV57 137 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 SMLR1H3BR10 107 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 M0QYT0 321 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 FABP7O15540 132 aa6.35□□□□□ -1.39
CDKAL1-202ENST00000378610 SELENOFO60613 162 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms