RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 PITPNBP48739 271 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 CASP9P55211 416 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 PEX3P56589 373 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 BPIFB3P59826 476 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 SRP54P61011 504 aaKnown RBP3.31□□□□□ -1.88
CUBN-201ENST00000377823 NUCB2P80303 420 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 RIGQ13278 110 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 ZNF146Q15072 292 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 FCN2Q15485 313 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 TRADDQ15628 312 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 ECSCRQ19T08 205 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 EPC2Q52LR7 807 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 MPPE1Q53F39 396 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 PRAMEF7Q5VXH5 474 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 RAB12Q6IQ22 244 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 DOK6Q6PKX4 331 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 ANGPTL8Q6UXH0 198 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 KRTAP7-1Q8IUC3 87 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 OR6M1Q8NGM8 313 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 EXOC6Q8TAG9 804 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 C11orf52Q96A22 123 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 MRPL24Q96A35 216 aaKnown RBP3.31□□□□□ -1.88
CUBN-201ENST00000377823 DHTKD1Q96HY7 919 aaPredicted RBP3.31□□□□□ -1.88
CUBN-201ENST00000377823 SLC45A3Q96JT2 553 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 RPGRIP1Q96KN7 1286 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 TNFRSF13CQ96RJ3 184 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 RUFY1Q96T51 708 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 PKP2Q99959 881 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 CABLES2Q9BTV7 478 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 LRRC61Q9BV99 259 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 FUNDC2Q9BWH2 189 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 GFRA4Q9GZZ7 299 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 DDX47Q9H0S4 455 aaKnown RBP3.31□□□□□ -1.88
CUBN-201ENST00000377823 ABCG8Q9H221 673 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 CARD9Q9H257 536 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 SLC26A1Q9H2B4 701 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 NCOR1P1Q9H4R4 102 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 GDF3Q9NR23 364 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 ANO10Q9NW15 660 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 NDUFA13Q9P0J0 144 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 TRIM10Q9UDY6 481 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 TBK1Q9UHD2 729 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 NARFQ9UHQ1 456 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 MUTYHQ9UIF7 546 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 DUSP12Q9UNI6 340 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 MRPS2Q9Y399 296 aaKnown RBP3.31□□□□□ -1.88
CUBN-201ENST00000377823 STRAPQ9Y3F4 350 aaKnown RBP3.31□□□□□ -1.88
CUBN-201ENST00000377823 RNF215Q9Y6U7 377 aa3.31□□□□□ -1.88
CUBN-201ENST00000377823 DDX49Q9Y6V7 483 aaKnown RBP3.31□□□□□ -1.88
CUBN-201ENST00000377823 CFAP65Q6ZU64 1925 aaKnown RBP3.31□□□□□ -1.88
CUBN-201ENST00000377823 TOP2BQ02880 1626 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 IGKV3D-15A0A087WSY6 115 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 YJEFN3A6XGL0 299 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 VGLL3A8MV65 326 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 ARHGEF33A8MVX0 844 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 M0QX08 132 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 EEF2KO00418 725 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 CSDE1O75534 798 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 ANXA9O76027 345 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 SORBS2O94875 1100 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 POP4O95707 220 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 FHP07954 510 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 PCP11498 1178 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 ZNF10P21506 573 aaPredicted RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 CD9P21926 228 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 OXTRP30559 389 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 CAPGP40121 348 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 ALDH3B1P43353 468 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 HNRNPFP52597 415 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 RPS27AP62979 156 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 ELAVL2Q12926 359 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 PKN2Q16513 984 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 C1orf189Q5VU69 101 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 NKAIN2Q5VXU1 208 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 RTL6Q6ICC9 239 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 CCBE1Q6UXH8 406 aaPredicted RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 FAM131BQ86XD5 332 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 BATF2Q8N1L9 274 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 CCNYQ8ND76 341 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 TMEM185AQ8NFB2 350 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 GOLGA5Q8TBA6 731 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 MIPOL1Q8TD10 442 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 LRRC15Q8TF66 581 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 ANKRD49Q8WVL7 239 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 ZNF689Q96CS4 500 aaPredicted RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 RAB39BQ96DA2 213 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 GPR137Q96N19 417 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 TMEM237Q96Q45 408 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 VGLL1Q99990 258 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 TRIM15Q9C019 465 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 TRPV6Q9H1D0 765 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 CXXC4Q9H2H0 198 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 PNNQ9H307 717 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 HPF1Q9NWY4 346 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 BLOC1S6Q9UL45 172 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 DIMT1Q9UNQ2 313 aaKnown RBP3.3□□□□□ -1.88
CUBN-201ENST00000377823 NIP7Q9Y221 180 aaKnown RBP eCLIP3.3□□□□□ -1.88
CUBN-201ENST00000377823 PRSS21Q9Y6M0 314 aa3.3□□□□□ -1.88
CUBN-201ENST00000377823 CEP164Q9UPV0 1460 aa3.29□□□□□ -1.88
CUBN-201ENST00000377823 A8MXK9 166 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms