RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ERVK-6Q9BXR3 956 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 WWTR1Q9GZV5 400 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 SLC6A15Q9H2J7 730 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 EXO5Q9H790 373 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 GRPEL1Q9HAV7 217 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 CNIH4Q9P003 139 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 ERVK-19Q9WJR5 959 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 PCDHGB3Q9Y5G1 929 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 KIAA1549Q9HCM3 1950 aa16.04■□□□□ 0.16
HLA-A-201ENST00000376802 A0A0A6YYD5 115 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 LRRC14BA6NHZ5 514 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 GLOD5A6NK44 160 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 DYRK3O43781 588 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 TMPRSS11DO60235 418 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 KRT38O76015 456 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 LRATO95237 230 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 GABRA1P14867 456 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 CRABP2P29373 138 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 TLX1P31314 330 aaPredicted RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 IST1P53990 364 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 RPS13P62277 151 aaKnown RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 IRF9Q00978 393 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 TBL3Q12788 808 aaKnown RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 SNTB1Q13884 538 aaKnown RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 ZNF267Q14586 743 aaPredicted RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 SLMAPQ14BN4 828 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 EBPQ15125 230 aaKnown RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 TRADDQ15628 312 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 SPRED3Q2MJR0 410 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 RIPPLY2Q5TAB7 128 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 LIPJQ5W064 366 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 ARSKQ6UWY0 536 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 ULK2Q8IYT8 1036 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 DND1Q8IYX4 353 aaKnown RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 ZNF441Q8N8Z8 693 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 FAM13CQ8NE31 585 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 MYRIPQ8NFW9 859 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 RHEBL1Q8TAI7 183 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 NEIL3Q8TAT5 605 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 FBF1Q8TES7 1133 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 KCTD4Q8WVF5 259 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 GAL3ST4Q96RP7 486 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 DDX31Q9H8H2 851 aaKnown RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 PRM3Q9NNZ6 103 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.03■□□□□ 0.165e-7■□□□□ 9.4
HLA-A-201ENST00000376802 QPCTLQ9NXS2 382 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 BOKQ9UMX3 212 aaPredicted RBP16.03■□□□□ 0.16
HLA-A-201ENST00000376802 PCDHGA11Q9Y5H2 935 aa16.03■□□□□ 0.16
HLA-A-201ENST00000376802 IQANK1A0A1B0GTG1 560 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 A0A1W2PS29 197 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 HMX2A2RU54 273 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 KDM4EB2RXH2 506 aaPredicted RBP16.02■□□□□ 0.16
HLA-A-201ENST00000376802 H0YIV9 168 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 TRIM3O75382 744 aaPredicted RBP16.02■□□□□ 0.16
HLA-A-201ENST00000376802 ZWINTO95229 277 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 PTX3P26022 381 aaPredicted RBP16.02■□□□□ 0.16
HLA-A-201ENST00000376802 SERPINB3P29508 390 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 GALNSP34059 522 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 TRPC1P48995 793 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 GUCY2DQ02846 1103 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 CUL3Q13618 768 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 SETDB1Q15047 1291 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 NTRK2Q16620 822 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 TMEM64Q6YI46 380 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 RNF111Q6ZNA4 994 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 SLC29A4Q7RTT9 530 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 MAATS1Q7Z4T9 603 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 MYLK4Q86YV6 388 aaPredicted RBP16.02■□□□□ 0.16
HLA-A-201ENST00000376802 NAXEQ8NCW5 288 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 RIT1Q92963 219 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 CXXC4Q9H2H0 198 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 LIME1Q9H400 295 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 ZNF358Q9NW07 568 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 DNAJB12Q9NXW2 375 aaKnown RBP16.02■□□□□ 0.16
HLA-A-201ENST00000376802 ACOT9Q9Y305 439 aa16.02■□□□□ 0.16
HLA-A-201ENST00000376802 ABCA4P78363 2273 aa16.02■□□□□ 0.15
HLA-A-201ENST00000376802 FAM221AA4D161 298 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 ANKRD33BA6NCL7 494 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 SYT5O00445 386 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 FAM58BPP0C7Q3 252 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 BUD31P41223 144 aaPredicted RBP16.01■□□□□ 0.15
HLA-A-201ENST00000376802 MAGEA4P43358 317 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 NEK2P51955 445 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 PLTPP55058 493 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 PFKFB4Q16877 469 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 POMZP3Q6PJE2 187 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 ZDHHC24Q6UX98 284 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 WDR53Q7Z5U6 358 aaPredicted RBP16.01■□□□□ 0.15
HLA-A-201ENST00000376802 RELL2Q8NC24 303 aaPredicted RBP16.01■□□□□ 0.15
HLA-A-201ENST00000376802 WDR20Q8TBZ3 569 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 FBXO25Q8TCJ0 367 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 JSRP1Q96MG2 331 aaPredicted RBP16.01■□□□□ 0.15
HLA-A-201ENST00000376802 GPR78Q96P69 363 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 PELOQ9BRX2 385 aaKnown RBP16.01■□□□□ 0.15
HLA-A-201ENST00000376802 CENPKQ9BS16 269 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 ACTR8Q9H981 624 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 CXorf21Q9HAI6 301 aa16.01■□□□□ 0.15
HLA-A-201ENST00000376802 RYDENQ9NUL5 291 aaKnown RBP16.01■□□□□ 0.15
HLA-A-201ENST00000376802 LYARQ9NX58 379 aaKnown RBP16.01■□□□□ 0.15
HLA-A-201ENST00000376802 PSD3Q9NYI0 1048 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms