RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 NYNRINQ9P2P1 1898 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 MED26O95402 600 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 PRLHRP49683 370 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 ILF3Q12906 894 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDR1-227ENST00000376570 CLCA4Q14CN2 919 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 SPATC1Q76KD6 591 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 TMEM126BQ8IUX1 230 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 CPEB1Q9BZB8 566 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 MUC13Q9H3R2 512 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 TMEM184CQ9NVA4 438 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 ARNTLO00327 626 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 CAPNS1P04632 268 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 H1F0P07305 194 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 FHP07954 510 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 MPC1LP0DKB6 136 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 ZNF155Q12901 538 aaPredicted RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 EXOSC7Q15024 291 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 GXYLT1Q4G148 440 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 UBE2UQ5VVX9 321 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 REEP3Q6NUK4 255 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 NIPAL1Q6NVV3 410 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 GALNT7Q86SF2 657 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 GPR149Q86SP6 731 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 DPP10Q8N608 796 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 RPLP0P6Q8NHW5 317 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 WDR12Q9GZL7 423 aaKnown RBP11.09□□□□□ -0.63
DDR1-227ENST00000376570 FGF22Q9HCT0 170 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 EYSQ5T1H1 3165 aa11.09□□□□□ -0.63
DDR1-227ENST00000376570 LOC110117498-PIK3R3F6TDL0 507 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 ANKRD28O15084 1053 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 TMPRSS11DO60235 418 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 MOSPD3O75425 235 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 GYPBP06028 91 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 IFI30P13284 250 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 CLK3P49761 638 aaKnown RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 TGM3Q08188 693 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 GINS1Q14691 196 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 SLC30A6Q6NXT4 461 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 PAQR6Q6TCH4 344 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 MYDGFQ969H8 173 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 CAMK1GQ96NX5 476 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 GFM1Q96RP9 751 aaKnown RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 WSB2Q9NYS7 404 aaPredicted RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 DNAJC13O75165 2243 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 GFRA2O00451 464 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 PLPP1O14494 284 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 KMOO15229 486 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 CAPN5O15484 640 aaPredicted RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 PCDHGA12O60330 932 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 TMCC2O75069 709 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 PAICSP22234 425 aaKnown RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 ITPKBP27987 946 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 STX4Q12846 297 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 C5orf22Q49AR2 442 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 VRK2Q86Y07 508 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 ZNF547Q8IVP9 402 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 PACRGLQ8N7B6 248 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 ZNF557Q8N988 423 aaPredicted RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 OR5T3Q8NGG3 340 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 STARD8Q92502 1023 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 QRFPRQ96P65 431 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 MYADMQ96S97 322 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 NMNAT1Q9HAN9 279 aaPredicted RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 IL1RAPQ9NPH3 570 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 SERHLQ9NQF3 203 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 SPATA7Q9P0W8 599 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 TMED5Q9Y3A6 229 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 PIAS3Q9Y6X2 628 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 TLR4O00206 839 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 ITGA2P17301 1181 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 CMPK1P30085 196 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 PPP2CBP62714 309 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 PPP2CAP67775 309 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 C1DQ13901 141 aaKnown RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 KIAA0040Q15053 153 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 NCF4Q15080 339 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 CRTC2Q53ET0 693 aaPredicted RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 MTFR2Q6P444 385 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 BORAQ6PGQ7 559 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 OR10H4Q8NGA5 316 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 TEX47Q8TBZ9 253 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 TSPEARQ8WU66 669 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 LGALS12Q96DT0 336 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 FAM46AQ96IP4 442 aaKnown RBP11.08□□□□□ -0.64
DDR1-227ENST00000376570 MBOAT4Q96T53 435 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 ZDHHC5Q9C0B5 715 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 CA14Q9ULX7 337 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 ATG4BQ9Y4P1 393 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 LOC285556D6RIA3 1793 aa11.08□□□□□ -0.64
DDR1-227ENST00000376570 GASTP01350 101 aa11.07□□□□□ -0.64
DDR1-227ENST00000376570 SLC35G6P0C7Q6 338 aa11.07□□□□□ -0.64
DDR1-227ENST00000376570 LAMP2P13473 410 aa11.07□□□□□ -0.64
DDR1-227ENST00000376570 CRISP3P54108 245 aa11.07□□□□□ -0.64
DDR1-227ENST00000376570 SHC2P98077 582 aa11.07□□□□□ -0.64
DDR1-227ENST00000376570 RGS1Q08116 209 aa11.07□□□□□ -0.64
DDR1-227ENST00000376570 DPY19L1Q2PZI1 675 aa11.07□□□□□ -0.64
DDR1-227ENST00000376570 ZNF776Q68DI1 518 aaPredicted RBP11.07□□□□□ -0.64
DDR1-227ENST00000376570 ZNF57Q68EA5 555 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms