RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 CES1P1Q9UKY3 287 aa13.22□□□□□ -0.29
CLCN6-203ENST00000376490 NPIPA1Q9UND3 350 aa13.22□□□□□ -0.29
CLCN6-203ENST00000376490 ERVK-19Q9WJR5 959 aa13.22□□□□□ -0.29
CLCN6-203ENST00000376490 STK38LQ9Y2H1 464 aa13.22□□□□□ -0.29
CLCN6-203ENST00000376490 A8MVJ9 347 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 KLRC4-KLRK1H3BQV0 150 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 ZNHIT1O43257 154 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 ESRRBO95718 433 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 ENO1P06733 434 aaKnown RBP13.21□□□□□ -0.29
CLCN6-203ENST00000376490 NUDT17P0C025 328 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 HSD3B1P14060 373 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 HSD3B2P26439 372 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 SERPINB3P29508 390 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 GALNSP34059 522 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 RFC3P40938 356 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 MEOX1P50221 254 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 DNAJB13P59910 316 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 GPR85P60893 370 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 HMGCS1Q01581 520 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 BTKQ06187 659 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 CSTF3Q12996 717 aaKnown RBP13.21□□□□□ -0.29
CLCN6-203ENST00000376490 C1QL3Q5VWW1 255 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 SIAH3Q8IW03 269 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 ART5Q96L15 291 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 PELOQ9BRX2 385 aaKnown RBP13.21□□□□□ -0.29
CLCN6-203ENST00000376490 PARD6BQ9BYG5 372 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 ACPTQ9BZG2 426 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 SHCBP1LQ9BZQ2 653 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 TIMMDC1Q9NPL8 285 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 DEPPQ9NTK1 212 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 OXSMQ9NWU1 459 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 HPF1Q9NWY4 346 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 KLF13Q9Y2Y9 288 aaPredicted RBP13.21□□□□□ -0.29
CLCN6-203ENST00000376490 PCDHA9Q9Y5H5 950 aa13.21□□□□□ -0.29
CLCN6-203ENST00000376490 SPTAN1Q13813 2472 aaKnown RBP13.2□□□□□ -0.3
CLCN6-203ENST00000376490 C1orf226A1L170 272 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 A1L4Q6 167 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 ESPNB1AK53 854 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 ASNA1O43681 348 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 GUCY1B2O75343 617 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 ERAL1O75616 437 aaKnown RBP13.2□□□□□ -0.3
CLCN6-203ENST00000376490 CLPSP04118 112 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 CT62P0C5K7 136 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 GP1BBP13224 206 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 CPMP14384 443 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 SSTR4P31391 388 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 SLC37A1P57057 533 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 RAE1P78406 368 aaKnown RBP13.2□□□□□ -0.3
CLCN6-203ENST00000376490 IFFO1Q0D2I5 559 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 KRTCAP3Q53RY4 240 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 PIGGQ5H8A4 983 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 CFAP157Q5JU67 520 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 HIST2H2BCQ6DN03 193 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 FAM180BQ6P0A1 224 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 SLC48A1Q6P1K1 146 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 EMBQ6PCB8 327 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 RNF111Q6ZNA4 994 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 FRMD7Q6ZUT3 714 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 TRABD2AQ86V40 505 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 FJX1Q86VR8 437 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 GBP7Q8N8V2 638 aaPredicted RBP13.2□□□□□ -0.3
CLCN6-203ENST00000376490 PSD4Q8NDX1 1056 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 NUBPLQ8TB37 319 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 RDH11Q8TC12 318 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 APIPQ96GX9 242 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 GPR137Q96N19 417 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 CXorf21Q9HAI6 301 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 TNFRSF12AQ9NP84 129 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 PLEKHB1Q9UF11 243 aaPredicted RBP13.2□□□□□ -0.3
CLCN6-203ENST00000376490 PLLPQ9Y342 182 aa13.2□□□□□ -0.3
CLCN6-203ENST00000376490 TRGV8A0A0C4DH27 118 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 A0A1B0GUH1 482 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 SERTM1A2A2V5 107 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 PINLYPA6NC86 204 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 SPAG7O75391 227 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 NADKO95544 446 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-203ENST00000376490 PORP16435 677 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-203ENST00000376490 PTGER1P34995 402 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 DEKP35659 375 aaKnown RBP13.19□□□□□ -0.3
CLCN6-203ENST00000376490 FEN1P39748 380 aaKnown RBP13.19□□□□□ -0.3
CLCN6-203ENST00000376490 ALDH9A1P49189 494 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 TRA2BP62995 288 aaKnown RBP13.19□□□□□ -0.3
CLCN6-203ENST00000376490 OPN5Q6U736 354 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 C10orf107Q8IVU9 208 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 GPALPP1Q8IXQ4 340 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 SRRM1Q8IYB3 904 aaKnown RBP13.19□□□□□ -0.3
CLCN6-203ENST00000376490 BANPQ8N9N5 519 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 CAVIN3Q969G5 261 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 RELTQ969Z4 430 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 ROPN1BQ9BZX4 212 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-203ENST00000376490 ROPN1Q9HAT0 212 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-203ENST00000376490 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.19□□□□□ -0.33e-7■■□□□ 12.4
CLCN6-203ENST00000376490 HEY2Q9UBP5 337 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 LGALS13Q9UHV8 139 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 MCM8Q9UJA3 840 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
CLCN6-203ENST00000376490 CCDC151A5D8V7 595 aa13.18□□□□□ -0.3
CLCN6-203ENST00000376490 G3V3Y1 287 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms