RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 RSL1D1O76021 490 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 RASAL1O95294 804 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 TRIM16O95361 564 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 PGM3O95394 542 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 H6PDO95479 791 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 FGF19O95750 216 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 LDLRP01130 860 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 KRT6AP02538 564 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 KRT6BP04259 564 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 C8GP07360 202 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ANXA6P08133 673 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ANXA5P08758 320 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CNPP09543 421 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 G6PDP11413 515 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CDH1P12830 882 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CCL5P13501 91 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 HOXB6P17509 224 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 CKMT2P17540 419 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 GGT1P19440 569 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 HRH2P25021 359 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 OXTRP30559 389 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 AKT1P31749 480 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 UQCRC1P31930 480 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SLC6A12P48065 614 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ALDH3B2P48448 385 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 KRT6CP48668 564 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 HSPA7P48741 367 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SUMO3P55854 103 aaPredicted RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 POLE2P56282 527 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 TIRAPP58753 221 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 DCDC1P59894 354 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 WDR5P61964 334 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 RPL38P63173 70 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 DEFB103AP81534 67 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ZNF33BQ06732 778 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 DYNC1I2Q13409 638 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 DAG1Q14118 895 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 GK3PQ14409 553 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 DMC1Q14565 340 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 STARD3Q14849 445 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ABRAXAS2Q15018 415 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 PHKG1Q16816 387 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CYP51A1Q16850 503 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 MYLK3Q32MK0 819 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 C18orf21Q32NC0 220 aaPredicted RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 PLEKHS1Q5SXH7 462 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CACHD1Q5VU97 1274 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 LRRC66Q68CR7 880 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 FAAH2Q6GMR7 532 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 KRT80Q6KB66 452 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CRTC1Q6UUV9 634 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SCIMPQ6UWF3 145 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 MSANTD1Q6ZTZ1 278 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 NEK10Q6ZWH5 1172 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 RTL10Q7L3V2 364 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 TSPAN33Q86UF1 283 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 KRT73Q86Y46 540 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 RASGRP3Q8IV61 690 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 RIMKLAQ8IXN7 391 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SYTL1Q8IYJ3 562 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ELMOD1Q8N336 334 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CBR4Q8N4T8 237 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CLDN19Q8N6F1 224 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 METTL25Q8N6Q8 603 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 RNF152Q8N8N0 203 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ZNF527Q8NB42 609 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 LEMD2Q8NC56 503 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 GPR26Q8NDV2 337 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 TSPAN14Q8NG11 270 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 OR6K2Q8NGY2 324 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SLC13A3Q8WWT9 602 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 POP5Q969H6 163 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 PPWD1Q96BP3 646 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 CTHRC1Q96CG8 243 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 DGCR14Q96DF8 476 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 SCRN2Q96FV2 425 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 RMND5BQ96G75 393 aaPredicted RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 NSMCE2Q96MF7 247 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 RDH12Q96NR8 316 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ZBTB18Q99592 522 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 COPS8Q99627 209 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 PRPF18Q99633 342 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 CGREF1Q99674 301 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CIB1Q99828 191 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 EGFL8Q99944 293 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SH3GL3Q99963 347 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SLC32A1Q9H598 525 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CLMPQ9H6B4 373 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 RPF2Q9H7B2 306 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 GAR1Q9NY12 217 aaKnown RBP4.58□□□□□ -1.68
USP48-202ENST00000374730 KLHL13Q9P2N7 655 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 THEGQ9P2T0 379 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SLC25A13Q9UJS0 675 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 CLEC4EQ9ULY5 219 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 PCDHGB4Q9UN71 923 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 SLC8A2Q9UPR5 921 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 AURKCQ9UQB9 309 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 MAN2B2Q9Y2E5 1009 aa4.58□□□□□ -1.68
USP48-202ENST00000374730 ANGPTL3Q9Y5C1 460 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms