RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 AMER3Q8N944 861 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 OR4C15Q8NGM1 316 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 FAM81AQ8TBF8 368 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 IPCEF1Q8WWN9 437 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PROX1Q92786 737 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 TMEM19Q96HH6 336 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 TEFMQ96QE5 360 aaKnown RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 POLMQ9NP87 494 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 ACSS1Q9NUB1 689 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CYP8B1Q9UNU6 501 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 LAMA1P25391 3075 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PPM1DO15297 605 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 WBP4O75554 376 aaKnown RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ZBTB11O95625 1053 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 FADS2O95864 444 aaKnown RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 POU2F1P14859 743 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 GGT2P36268 569 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ABATP80404 500 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 RPE65Q16518 533 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 LAIR1Q6GTX8 287 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 AHSA2Q719I0 299 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 TMEM145Q8NBT3 493 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 CSF3RQ99062 836 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 NIPSNAP1Q9BPW8 284 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 MACROD1Q9BQ69 325 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 SMOC1Q9H4F8 434 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ACER3Q9NUN7 267 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 RHCGQ9UBD6 479 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 RNF6Q9Y252 685 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 SNX11Q9Y5W9 270 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 COLEC10Q9Y6Z7 277 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 DNAH14Q0VDD8 3507 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 A0A0A6YYD5 115 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 GLOD5A6NK44 160 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 PCDH17O14917 1159 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ERI3O43414 337 aaKnown RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 BCAS1O75363 584 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 PDE9AO76083 593 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 CCNB2O95067 398 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 MT-ND2P03891 347 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 TFPTP0C1Z6 253 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 PSMB9P28065 219 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 HOXA6P31267 233 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 BCL6P41182 706 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 FRKP42685 505 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ST13P50502 369 aaKnown RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 SLAMF1Q13291 335 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 DGCR6Q14129 220 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 TCEA2Q15560 299 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 PRSS48Q7RTY5 328 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ANKRD13BQ86YJ7 626 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 OR9Q2Q8NGE9 314 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 TBC1D15Q8TC07 691 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 UTP15Q8TED0 518 aaKnown RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 UCN3Q969E3 161 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 GTPBP3Q969Y2 492 aaKnown RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 FKBP10Q96AY3 582 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ZNF764Q96H86 408 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 BBS4Q96RK4 519 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ZNF607Q96SK3 696 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 RHNO1Q9BSD3 238 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 KLHL31Q9H511 634 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 SIRT3Q9NTG7 399 aaPredicted RBP11.44□□□□□ -0.58
HMGCL-202ENST00000374487 TAS2R7Q9NYW3 318 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 ENPP5Q9UJA9 477 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 HEBP2Q9Y5Z4 205 aa11.44□□□□□ -0.58
HMGCL-202ENST00000374487 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 HMGN4O00479 90 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 HAT1O14929 419 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 SLC28A2O43868 658 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 MRPS14O60783 128 aaKnown RBP11.43□□□□□ -0.58
HMGCL-202ENST00000374487 GUCY1B2O75343 617 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 ERAL1O75616 437 aaKnown RBP11.43□□□□□ -0.58
HMGCL-202ENST00000374487 CMPK1P30085 196 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 NTSP30990 170 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 NCBP2P52298 156 aaKnown RBP eCLIP11.43□□□□□ -0.58
HMGCL-202ENST00000374487 HMGA2P52926 109 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 EMP3P54852 163 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 MVKQ03426 396 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 SLC16A12Q6ZSM3 486 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 TMEFF1Q8IYR6 380 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 OR2L3Q8NG85 312 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 SIPA1Q96FS4 1042 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 ALPK1Q96QP1 1244 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 FBRSQ9HAH7 460 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 FGF22Q9HCT0 170 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 PREBQ9HCU5 417 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 SLC35C2Q9NQQ7 365 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 IMPAD1Q9NX62 359 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 EHD3Q9NZN3 535 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 TRPC4Q9UBN4 977 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 ENOPH1Q9UHY7 261 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 NCKAP1Q9Y2A7 1128 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 ABCA7Q8IZY2 2146 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 CKAP5Q14008 2032 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 PRSS38A1L453 326 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 A8MVJ9 347 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 ISM1B1AKI9 464 aa11.43□□□□□ -0.58
HMGCL-202ENST00000374487 GFRA3O60609 400 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms