RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 SLC46A3Q7Z3Q1 461 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 LYSMD2Q8IV50 215 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 LAS2Q8IYD9 372 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 DEPDC4Q8N2C3 294 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 SLC35B4Q969S0 331 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 RAB11FIP5Q9BXF6 653 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 KLHL25Q9H0H3 589 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 DMRT3Q9NQL9 472 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 SPASTQ9UBP0 616 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 ERVK-11Q9UQG0 969 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 HEBP2Q9Y5Z4 205 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 SPAG17Q6Q759 2223 aa12.59□□□□□ -0.39
A1CF-204ENST00000373997 TNFRSF11BO00300 401 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 TNFP01375 233 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 RPLP0P05388 317 aaKnown RBP12.58□□□□□ -0.4
A1CF-204ENST00000373997 CRYBA2P53672 197 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 CYP4F2P78329 520 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 KRR1Q13601 381 aaKnown RBP12.58□□□□□ -0.4
A1CF-204ENST00000373997 RGNQ15493 299 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 MAPK11Q15759 364 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 SYT16Q17RD7 645 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 TMIGD1Q6UXZ0 262 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 ADCK2Q7Z695 626 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 NRROSQ86YC3 692 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 KRT78Q8N1N4 520 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 OR2L8Q8NGY9 312 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 CXorf40BQ96DE9 158 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 COL21A1Q96P44 957 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 PCBD2Q9H0N5 130 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 OR51B5Q9H339 312 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 PELI2Q9HAT8 420 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 TMEM165Q9HC07 324 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 ZNF282Q9UDV7 671 aaPredicted RBP12.58□□□□□ -0.4
A1CF-204ENST00000373997 VPS4AQ9UN37 437 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 POFUT2Q9Y2G5 429 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 LYVE1Q9Y5Y7 322 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 FEZF1A0PJY2 475 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 H7BY64 318 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 YY2O15391 372 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 PTTG1O95997 202 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 DCNP07585 359 aaKnown RBP12.58□□□□□ -0.4
A1CF-204ENST00000373997 CELA2BP08218 269 aaPredicted RBP12.58□□□□□ -0.4
A1CF-204ENST00000373997 SELENOWP63302 87 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 OLR1P78380 273 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 PRKCDQ05655 676 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 ILF3Q12906 894 aaKnown RBP eCLIP12.58□□□□□ -0.42e-8■■■■□ 22.8
A1CF-204ENST00000373997 EIF2B5Q13144 721 aaKnown RBP12.58□□□□□ -0.4
A1CF-204ENST00000373997 BCL2A1Q16548 175 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 TOR1AIP1Q5JTV8 583 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 FAM129CQ86XR2 697 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 CHTF18Q8WVB6 975 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 COQ8BQ96D53 544 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 CRELD1Q96HD1 420 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 TXNDC15Q96J42 360 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 PRAP1Q96NZ9 151 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 KCNC2Q96PR1 638 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 NELL2Q99435 816 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 CHRDQ9H2X0 955 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 ZBTB20Q9HC78 741 aaPredicted RBP12.58□□□□□ -0.4
A1CF-204ENST00000373997 ZNF624Q9P2J8 865 aaPredicted RBP12.58□□□□□ -0.4
A1CF-204ENST00000373997 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.4
A1CF-204ENST00000373997 COLEC10Q9Y6Z7 277 aa12.58□□□□□ -0.4
A1CF-204ENST00000373997 MN1Q10571 1320 aaPredicted RBP12.57□□□□□ -0.4
A1CF-204ENST00000373997 DNAH14Q0VDD8 3507 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 GADD45AP24522 165 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 HOXD12P35452 270 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 CCR8P51685 355 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 RAE1P78406 368 aaKnown RBP12.57□□□□□ -0.4
A1CF-204ENST00000373997 RBBP4Q09028 425 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 FZD2Q14332 565 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 SPEM1Q8N4L4 309 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 OR10G2Q8NGC3 310 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 GGHQ92820 318 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 UBE2E3Q969T4 207 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 FEVQ99581 238 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 AIF1LQ9BQI0 150 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 ORAI3Q9BRQ5 295 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 WASH6PQ9NQA3 447 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 ABCB10Q9NRK6 738 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 NDUFAF4Q9P032 175 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 KLF15Q9UIH9 416 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 BTBD3Q9Y2F9 522 aa12.57□□□□□ -0.4
A1CF-204ENST00000373997 SPTY2D1-AS1A0A0U1RR47 76 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 GABRR3A8MPY1 467 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 TMEM229AB2RXF0 380 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 RNASET2O00584 256 aaKnown RBP12.56□□□□□ -0.4
A1CF-204ENST00000373997 VIPP01282 170 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 GBAP04062 536 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 NUDT7P0C024 238 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 F3P13726 295 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 ITGA2P17301 1181 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 C21orf33P30042 268 aaPredicted RBP12.56□□□□□ -0.4
A1CF-204ENST00000373997 PEBP1P30086 187 aaKnown RBP12.56□□□□□ -0.4
A1CF-204ENST00000373997 S100A5P33763 92 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 SLC19A1P41440 591 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 REEP5Q00765 189 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 IFI44LQ53G44 452 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 SPIN4Q56A73 249 aa12.56□□□□□ -0.4
A1CF-204ENST00000373997 PRRT3Q5FWE3 981 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms