RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 MATN1P21941 496 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 PUM1Q14671 1186 aaKnown RBP eCLIP18.48■□□□□ 0.551e-7■■■■□ 23.2
HDAC1-201ENST00000373548 SYPL1Q16563 259 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 OR52J3Q8NH60 311 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 XAGE5Q8WWM1 108 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 THAP11Q96EK4 314 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 C10orf90Q96M02 699 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 PIP5K1AQ99755 562 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 ZFYVE21Q9BQ24 234 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 P2RX2Q9UBL9 471 aa18.48■□□□□ 0.55
HDAC1-201ENST00000373548 PDE9AO76083 593 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 EEF1B2P24534 225 aaKnown RBP18.47■□□□□ 0.55
HDAC1-201ENST00000373548 PRKAG1P54619 331 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 UBXN2BQ14CS0 331 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 SUZ12Q15022 739 aaKnown RBP18.47■□□□□ 0.55
HDAC1-201ENST00000373548 DEFB134Q4QY38 66 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 TMEM107Q6UX40 140 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 ZNF605Q86T29 641 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 BAHD1Q8TBE0 780 aaPredicted RBP18.47■□□□□ 0.55
HDAC1-201ENST00000373548 SGCDQ92629 289 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 TREX2Q9BQ50 279 aaPredicted RBP18.47■□□□□ 0.55
HDAC1-201ENST00000373548 LRRC61Q9BV99 259 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 GIMAP4Q9NUV9 329 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 KCMF1Q9P0J7 381 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 ENO4A6NNW6 628 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 IFNW1P05000 195 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 FUT4P22083 530 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 KHKP50053 298 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 BLKP51451 505 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 RPS6KA3P51812 740 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 PPP1CAP62136 330 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 ESRRGP62508 458 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 IL5RAQ01344 420 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 TNFRSF17Q02223 184 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 KCNC4Q03721 635 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 RELAQ04206 551 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 EXOC3L2Q2M3D2 409 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 ZBED5Q49AG3 693 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 KCTD8Q6ZWB6 473 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 GPR141Q7Z602 305 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 DEFB119Q8N690 84 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 CAMKVQ8NCB2 501 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 SETD9Q8NE22 299 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 FAM46DQ8NEK8 389 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 OR10G2Q8NGC3 310 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 OTUB1Q96FW1 271 aaPredicted RBP18.47■□□□□ 0.55
HDAC1-201ENST00000373548 SERINC2Q96SA4 455 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 FEVQ99581 238 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 ROGDIQ9GZN7 287 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 POLR1BQ9H9Y6 1135 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 ACER3Q9NUN7 267 aa18.47■□□□□ 0.55
HDAC1-201ENST00000373548 NDRG4Q9ULP0 352 aaKnown RBP18.47■□□□□ 0.55
HDAC1-201ENST00000373548 A0A0J9YY10 115 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 KRBA1A5PL33 1030 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 E9PQ18 207 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 H0YGG7 62 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 AHCYL1O43865 530 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 KIF1CO43896 1103 aaKnown RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 DNAJB6O75190 326 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 HMGN2P05204 90 aaKnown RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 FHP07954 510 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 JUNDP17535 347 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 MPIP34949 423 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 PXNP49023 591 aaPredicted RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 RGS19P49795 217 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 ARF3P61204 181 aaPredicted RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 HHEXQ03014 270 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 CDK5R2Q13319 367 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 PMS2P3Q13401 168 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 RUNX2Q13950 521 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 LASP1Q14847 261 aaKnown RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 SLC5A8Q8N695 610 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 OR9A2Q8NGT5 310 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 CNIH3Q8TBE1 160 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 YIPF4Q9BSR8 244 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 FOXQ1Q9C009 403 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 RLIMQ9NVW2 624 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 MRPS2Q9Y399 296 aaKnown RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 FAM32AQ9Y421 112 aaKnown RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 GMPPBQ9Y5P6 360 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 ZNF780BQ9Y6R6 833 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 TMEM247A6NEH6 219 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 URADA6NGE7 173 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 WNT1P04628 370 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 NR2F1P10589 423 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 RHCEP18577 417 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 MC3RP41968 323 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 MAGEA8P43361 318 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 LIMS1P48059 325 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 NPRL3Q12980 569 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 MICAQ29983 383 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 BROXQ5VW32 411 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 BHLHB9Q6PI77 547 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 RNF44Q7L0R7 432 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 LGI4Q8N135 537 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 OR56A1Q8NGH5 318 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 FAM174AQ8TBP5 190 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 ZDHHC1Q8WTX9 485 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 MOAP1Q96BY2 351 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 COL21A1Q96P44 957 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms