RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ULBP3Q9BZM4 244 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 SELENONQ9NZV5 590 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 ZFHX4Q86UP3 3567 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 FER1L5A0AVI2 2057 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 G3V2T6 193 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 STMND1H3BQB6 276 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 MRPS14O60783 128 aaKnown RBP19.37■□□□□ 0.69
SYNC-201ENST00000373484 SCELO95171 688 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 DLGAP3O95886 979 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 TFPTP0C1Z6 253 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 PCSK2P16519 638 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 ELK4P28324 431 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 IL12AP29459 219 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 RYKP34925 604 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 HSPA7P48741 367 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 RPS3AP61247 264 aaKnown RBP19.37■□□□□ 0.69
SYNC-201ENST00000373484 PPP2R2BQ00005 443 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 OXA1LQ15070 435 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 FBXO48Q5FWF7 155 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 GALNT18Q6P9A2 607 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 NCCRP1Q6ZVX7 275 aaPredicted RBP19.37■□□□□ 0.69
SYNC-201ENST00000373484 R3HCC1LQ7Z5L2 792 aaKnown RBP19.37■□□□□ 0.69
SYNC-201ENST00000373484 ADCK2Q7Z695 626 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 DTX1Q86Y01 620 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 ZNF248Q8NDW4 579 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 CHDHQ8NE62 594 aaPredicted RBP19.37■□□□□ 0.69
SYNC-201ENST00000373484 ABHD11Q8NFV4 315 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 UBTD2Q8WUN7 234 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 NEIL2Q969S2 332 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 ESAMQ96AP7 390 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 PSD2Q9BQI7 771 aa19.37■□□□□ 0.69
SYNC-201ENST00000373484 TNPO3Q9Y5L0 923 aaKnown RBP19.37■□□□□ 0.69
SYNC-201ENST00000373484 URB1O60287 2271 aaKnown RBP19.37■□□□□ 0.69
SYNC-201ENST00000373484 MAP1BP46821 2468 aaKnown RBP19.36■□□□□ 0.69
SYNC-201ENST00000373484 C9JVG2 144 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 SCRG1O75711 98 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 STK16O75716 305 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 OR2B3O76000 313 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 CTSBP07858 339 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 LIPCP11150 499 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 CSNK1G2P78368 415 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 OTUD3Q5T2D3 398 aaPredicted RBP19.36■□□□□ 0.69
SYNC-201ENST00000373484 STK32CQ86UX6 486 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 GPR135Q8IZ08 494 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 FBLIM1Q8WUP2 373 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 SLC5A11Q8WWX8 675 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 ZNF285Q96NJ3 590 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 TOR3AQ9H497 397 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 ENAMQ9NRM1 1142 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 ZNF225Q9UK10 706 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 DYRK1BQ9Y463 629 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 TIMM22Q9Y584 194 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 SNX5Q9Y5X3 404 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 KCNE2Q9Y6J6 123 aa19.36■□□□□ 0.69
SYNC-201ENST00000373484 TTC36A6NLP5 189 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 E7EQ34 232 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 M0QX08 132 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 HAT1O14929 419 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 SLC22A1O15245 554 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 SLC16A6O15403 523 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 RSL1D1O76021 490 aaKnown RBP19.35■□□□□ 0.69
SYNC-201ENST00000373484 EIF2S3P41091 472 aaKnown RBP19.35■□□□□ 0.69
SYNC-201ENST00000373484 YAP1P46937 504 aaKnown RBP19.35■□□□□ 0.69
SYNC-201ENST00000373484 FRMPD2BQ6IN97 320 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 TMEM214Q6NUQ4 689 aaKnown RBP19.35■□□□□ 0.69
SYNC-201ENST00000373484 IGFN1Q86VF2 1251 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 FNDC5Q8NAU1 212 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 GLB1L3Q8NCI6 653 aaPredicted RBP19.35■□□□□ 0.69
SYNC-201ENST00000373484 OR4K1Q8NGD4 311 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 OR2T11Q8NH01 316 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 TBC1D20Q96BZ9 403 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 SH3YL1Q96HL8 342 aaPredicted RBP19.35■□□□□ 0.69
SYNC-201ENST00000373484 CD244Q9BZW8 370 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 SPRTNQ9H040 489 aaPredicted RBP19.35■□□□□ 0.69
SYNC-201ENST00000373484 C3orf18Q9UK00 162 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 RAXQ9Y2V3 346 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 ASB1Q9Y576 335 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 SEC16AO15027 2179 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 SRPX2O60687 465 aaPredicted RBP19.35■□□□□ 0.69
SYNC-201ENST00000373484 UGT2B11O75310 529 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 NTRK1P04629 796 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 AGTR2P50052 363 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 PCBP2Q15366 365 aaKnown RBP eCLIP19.35■□□□□ 0.69
SYNC-201ENST00000373484 RBBP7Q16576 425 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 TRIM16LQ309B1 348 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 PRAMEF17Q5VTA0 474 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 Q6ZSR9 355 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 LRRC70Q7Z2Q7 622 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 RNF31Q96EP0 1072 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 OR2A5Q96R48 311 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 SYNPO2LQ9H987 977 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 NECTIN3Q9NQS3 549 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 DNAJC11Q9NVH1 559 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 HSPE1-MOB4S4R3N1 261 aa19.35■□□□□ 0.69
SYNC-201ENST00000373484 LOC105369274A0A096LPK9 316 aa19.34■□□□□ 0.69
SYNC-201ENST00000373484 LOC102723532A0A0G2JNH3 316 aa19.34■□□□□ 0.69
SYNC-201ENST00000373484 A0A1B0GTL3 188 aa19.34■□□□□ 0.69
SYNC-201ENST00000373484 E2F3O00716 465 aa19.34■□□□□ 0.69
SYNC-201ENST00000373484 ANKRD28O15084 1053 aa19.34■□□□□ 0.69
SYNC-201ENST00000373484 CPNE3O75131 537 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms