RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 SLC22A31A6NKX4 558 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 A8MV72 311 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 RETP07949 1114 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 MRPL3P09001 348 aaKnown RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ETFAP13804 333 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 PFKLP17858 780 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ARRB1P49407 418 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 BMXP51813 675 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 SLAMF1Q13291 335 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 SNTA1Q13424 505 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 PRRT3Q5FWE3 981 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 CATSPEREQ5SY80 951 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ENPP6Q6UWR7 440 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 PRSS48Q7RTY5 328 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 VTCN1Q7Z7D3 282 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 OR5J2Q8NH18 312 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 SGCDQ92629 289 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 CMKLR1Q99788 373 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 SERTAD3Q9UJW9 196 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 H3BSH0 61 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 FBP2O00757 339 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 AXIN1O15169 862 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ADH1BP00325 375 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 PTNP21246 168 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 GLP1RP43220 463 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 OCLNQ16625 522 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 BTBD16Q32M84 506 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 DEFB134Q4QY38 66 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ALG10Q5BKT4 473 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM151AQ8N4L1 468 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 DENND6BQ8NEG7 585 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 OR56A3Q8NH54 315 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 CASTOR1Q8WTX7 329 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM246Q9BRR3 403 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 TTTY10Q9BZA0 68 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM45AQ9NWC5 275 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 PCDHGA7Q9Y5G6 932 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ENPP4Q9Y6X5 453 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 SH3D21A4FU49 640 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 HTR3EA5X5Y0 456 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 CLCA1A8K7I4 914 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 GPR32O75388 356 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 KLK3P07288 261 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 NDUFV2P19404 249 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 LHCGRP22888 699 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 DNASE1P24855 282 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 CD68P34810 354 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 GABRA3P34903 492 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 FXYD6P3P58550 94 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 EIF4HQ15056 248 aaKnown RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ZMYND11Q15326 602 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ITPRIPL2Q3MIP1 535 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 GTF2IRD2BQ6EKJ0 949 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ASPGQ86U10 573 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 GTF2IRD2Q86UP8 949 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 OR52N2Q8NGI0 321 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 OR8K3Q8NH51 312 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 FBXO27Q8NI29 283 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 HS6ST2Q96MM7 605 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 IL17FQ96PD4 163 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 SYT11Q9BT88 431 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 DPH7Q9BTV6 452 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 POTEKPQ9BYX7 375 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 PTGES2Q9H7Z7 377 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 RNF121Q9H920 327 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 PCDHB16Q9NRJ7 776 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 CLDND1Q9NY35 253 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 C14orf166Q9Y224 244 aaKnown RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 FARSAQ9Y285 508 aaKnown RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 OR2B3O76000 313 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 PLGP00747 810 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 DCTP40126 519 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 MAGEA6P43360 314 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 SPINT3P49223 89 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 GAS6Q14393 721 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 NXPE4Q6UWF7 544 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 NCCRP1Q6ZVX7 275 aaPredicted RBP10.93□□□□□ -0.66
PTPRF-203ENST00000372407 MS4A15Q8N5U1 240 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 OR52P1PQ8NH57 321 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 SLC2A11Q9BYW1 496 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 ACTR6Q9GZN1 396 aa10.93□□□□□ -0.66
PTPRF-203ENST00000372407 WASHC1A8K0Z3 465 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 WASH3PC4AMC7 463 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 EIF1AYO14602 144 aaKnown RBP10.92□□□□□ -0.66
PTPRF-203ENST00000372407 MAGEA8P43361 318 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 MAN2A2P49641 1150 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 S100A10P60903 97 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ATXN7L3Q14CW9 347 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM35AQ53FP2 167 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 C1orf189Q5VU69 101 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 B3GNT9Q6UX72 402 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 WASH2PQ6VEQ5 465 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 AMIGO1Q86WK6 493 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 CLECL1Q8IZS7 167 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 OR4K5Q8NGD3 323 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM234Q8WY98 164 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 KCNN1Q92952 543 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 PNPLA2Q96AD5 504 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 SCRN2Q96FV2 425 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 BCL7BQ9BQE9 202 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms