RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 FBXO32Q969P5 355 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 GTPBP3Q969Y2 492 aaKnown RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 OTULINQ96BN8 352 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 SLC38A2Q96QD8 506 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 IL4I1Q96RQ9 567 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 H2AFJQ9BTM1 129 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 KCTD5Q9NXV2 234 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 MARCH2Q9P0N8 246 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 COPZ2Q9P299 210 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 PCDHB11Q9Y5F2 797 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 RAI2Q9Y5P3 530 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 SYN3O14994 580 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 B3GALT4O96024 378 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 SULT1A3P0DMM9 295 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 SULT1A4P0DMN0 295 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 ZNF140P52738 457 aaPredicted RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 DCDC1P59894 354 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 CSTF1Q05048 431 aaKnown RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 ZNF91Q05481 1191 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 TPBGQ13641 420 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 TSC22D1Q15714 1073 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 GPR68Q15743 365 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 CYP27C1Q4G0S4 372 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 MPP7Q5T2T1 576 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 C3P1Q6ZMU1 363 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 PCSK9Q8NBP7 692 aaKnown RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 SCRN2Q96FV2 425 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 UBL7Q96S82 380 aaPredicted RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 SEMA3CQ99985 751 aa17.42■□□□□ 0.38
MMP9-201ENST00000372330 POLR1EQ9GZS1 481 aaKnown RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 NSUN3Q9H649 340 aaKnown RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 EXO1Q9UQ84 846 aaKnown RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 SPIN1Q9Y657 262 aaPredicted RBP17.42■□□□□ 0.38
MMP9-201ENST00000372330 TEX13CA0A0J9YWL9 993 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 GPR171O14626 319 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 PRMT3O60678 531 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 FGF2P09038 288 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 POU2F1P14859 743 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 PRPH2P23942 346 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 OR1E1P30953 314 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 LCN1P31025 176 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 LIMS1P48059 325 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 RPL6Q02878 288 aaKnown RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 CTXN3Q4LDR2 81 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 CTSL3PQ5NE16 218 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 C10orf120Q5SQS8 335 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 ZNF600Q6ZNG1 722 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 FGD2Q7Z6J4 655 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 CIR1Q86X95 450 aaPredicted RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 EIF4E3Q8N5X7 224 aaKnown RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 OR8J1Q8NGP2 316 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 LINC01599Q8WXQ3 324 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 ACOT12Q8WYK0 555 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 RFT1Q96AA3 541 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 NLNQ9BYT8 704 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 TPT1P8Q9HAU6 139 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 TLR8Q9NR97 1041 aaKnown RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 NUDT15Q9NV35 164 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 FAM120CQ9NX05 1096 aaKnown RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 POMT2Q9UKY4 750 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 CASP8AP2Q9UKL3 1982 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 HNRNPCL2B2RXH8 293 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 TAPBPO15533 448 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 NR2F6P10588 404 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 CKBP12277 381 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 PSMA3P25788 255 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 GSTM5P46439 218 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 CTBP2P56545 445 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 YBEYP58557 167 aaPredicted RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 CYP4F8P98187 520 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 TAF10Q12962 218 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 OPCMLQ14982 345 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 ETFDHQ16134 617 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 OCLNQ16625 522 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 CD200R1LQ6Q8B3 271 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 HSD17B13Q7Z5P4 300 aaPredicted RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 C11orf65Q8NCR3 313 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 ACPTQ9BZG2 426 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 SLC19A3Q9BZV2 496 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 MS4A7Q9GZW8 240 aaPredicted RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 ACER3Q9NUN7 267 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 FZD4Q9ULV1 537 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 SF3B6Q9Y3B4 125 aaKnown RBP17.41■□□□□ 0.38
MMP9-201ENST00000372330 NPTNQ9Y639 398 aa17.41■□□□□ 0.38
MMP9-201ENST00000372330 DSPPQ9NZW4 1301 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 PIPSLA2A3N6 862 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 MOXD2PA6NHM9 499 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 MPTX1A8MV57 137 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 LOC730098B7Z3J9 87 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 GJB3O75712 270 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 OR5F1O95221 314 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 IGLV3-27P01718 113 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 SDC1P18827 310 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 GABRA5P31644 462 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 TRIM23P36406 574 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 ACVRL1P37023 503 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 AVPR1BP47901 424 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 FAM189BP81408 668 aa17.4■□□□□ 0.38
MMP9-201ENST00000372330 NTRK2Q16620 822 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms