RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TACSTD2P09758 323 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 HRH2P25021 359 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 ATP6AP1Q15904 470 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF705AQ6ZN79 300 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 SDR16C5Q8N3Y7 309 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 ARMC5Q96C12 935 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 RANBP9Q96S59 729 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 TBX5Q99593 518 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 TNFRSF10DQ9UBN6 386 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 MED31Q9Y3C7 131 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 AURKAO14965 403 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 XPNPEP2O43895 674 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 ARHGAP11BQ3KRB8 267 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 PM20D1Q6GTS8 502 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR4F3Q6IEY1 312 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 AMIGO1Q86WK6 493 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 NR4A3Q92570 626 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 GIMAP5Q96F15 307 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 RGCCQ9H4X1 137 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 LDAHQ9H6V9 325 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 METTL7AQ9H8H3 244 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 FTSJ1Q9UET6 329 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 RNF11Q9Y3C5 154 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 POMT1Q9Y6A1 747 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 PABPC4LP0CB38 370 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 FGF3P11487 239 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 LIMK1P53667 647 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 WNT7BP56706 349 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 ABHD18Q0P651 414 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 POU4F2Q12837 409 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZDHHC14Q8IZN3 488 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR5AK3PQ8NH89 298 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 C1orf216Q8TAB5 229 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 MMABQ96EY8 250 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 BARD1Q99728 777 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 NEUROD4Q9HD90 331 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 JUNP05412 331 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 NUDT6P53370 316 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 RNF4P78317 190 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF542PQ5EBM4 170 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 PDSS1Q5T2R2 415 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 B3GNT9Q6UX72 402 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR2B2Q9GZK3 357 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR51B5Q9H339 312 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF696Q9H7X3 374 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 MOCS1Q9NZB8 636 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 A0A0A6YYH2 397 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 TRBC2A0A5B9 178 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 A6NJ64 397 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF182P17025 639 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 ARSFP54793 590 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 GSTM4Q03013 218 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 RABEPKQ7Z6M1 372 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR2AJ1Q8NGZ0 328 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 RELTQ969Z4 430 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 RTCAO00442 366 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF823P16415 610 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 TLR1Q15399 786 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 METTL27Q8N6F8 245 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 ANKRD53Q8N9V6 530 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 FGF13Q92913 245 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 CREB3L1Q96BA8 519 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 HSH2DQ96JZ2 352 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 ACTL8Q9H568 366 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 TRPV4Q9HBA0 871 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 RASAL1O95294 804 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 RENP00797 406 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 PRPF38BQ5VTL8 546 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR9I1Q8NGQ6 314 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 FNDC8Q8TC99 324 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 PHOX2BQ99453 314 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 TAS2R3Q9NYW6 316 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 ST14Q9Y5Y6 855 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 H7BY64 318 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 TRAPPC6AO75865 159 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 AFF3P51826 1226 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 EMX2Q04743 252 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 TRIM61Q5EBN2 209 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 FAM26DQ5JW98 314 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 KANSL1Q7Z3B3 1105 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR56A1Q8NGH5 318 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 JPH3Q8WXH2 748 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 TMEM74Q96NL1 305 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 PRAP1Q96NZ9 151 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 RNF121Q9H920 327 aa12.76□□□□□ -0.37
RAPGEF1-201ENST00000372189 FAM170BA6NMN3 283 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 K7EPK0 472 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 HPRP00739 348 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 FAM71E2Q8N5Q1 922 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 CLSTN3Q9BQT9 956 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 REEP4Q9H6H4 257 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 A0A1W2PRQ8 180 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF726A6NNF4 738 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 SRCP12931 536 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 SCGB2A2Q13296 93 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 SNTA1Q13424 505 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 ASPGQ86U10 573 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 AQP11Q8NBQ7 271 aa12.75□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR5M3Q8NGP4 307 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms