RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ISL1P61371 349 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 TARDBPQ13148 414 aaKnown RBP eCLIP13.33□□□□□ -0.28
LDB3-204ENST00000372066 KRT33BQ14525 404 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 SAXO2Q658L1 398 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 DUS1LQ6P1R4 473 aaKnown RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 WASH2PQ6VEQ5 465 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 LMNTD1Q8N9Z9 388 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 OR2A1Q8NGT9 310 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 GEMIN6Q8WXD5 167 aaKnown RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 TMIGD2Q96BF3 282 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 ZBED6CLQ96FA7 236 aaPredicted RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 CRELD1Q96HD1 420 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 TPD52L3Q96J77 140 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 BBC3Q96PG8 261 aaPredicted RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 OR2M4Q96R27 311 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 PITX2Q99697 317 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 DOK1Q99704 481 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 FAIM2Q9BWQ8 316 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 KIR3DX1Q9H7L2 352 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 IMP3Q9NV31 184 aaKnown RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 PDP1Q9P0J1 537 aaPredicted RBP13.33□□□□□ -0.28
LDB3-204ENST00000372066 WDR37Q9Y2I8 494 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 COLEC10Q9Y6Z7 277 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 U3KQV3 271 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 NBEAQ8NFP9 2946 aa13.33□□□□□ -0.28
LDB3-204ENST00000372066 H7BY64 318 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 M0QX08 132 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 OR1F1O43749 312 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 GUCY1B2O75343 617 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PDE9AO76083 593 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 C1QCP02747 245 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PSMB5P28074 263 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 SLC5A2P31639 672 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 TSFMP43897 325 aaKnown RBP13.32□□□□□ -0.28
LDB3-204ENST00000372066 PCBP3P57721 371 aaKnown RBP13.32□□□□□ -0.28
LDB3-204ENST00000372066 NUP107P57740 925 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 CD47Q08722 323 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 RAB39AQ14964 217 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 C16orf72Q14CZ0 275 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 SLC5A12Q1EHB4 618 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 COX20Q5RI15 118 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 HES3Q5TGS1 186 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 CLVS1Q8IUQ0 354 aaPredicted RBP13.32□□□□□ -0.28
LDB3-204ENST00000372066 ARMC8Q8IUR7 673 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 C2orf73Q8N5S3 287 aaPredicted RBP13.32□□□□□ -0.28
LDB3-204ENST00000372066 SRFBP1Q8NEF9 429 aaKnown RBP13.32□□□□□ -0.28
LDB3-204ENST00000372066 PSMA8Q8TAA3 256 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 ISOC1Q96CN7 298 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 NXPE2Q96DL1 559 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PDXPQ96GD0 296 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PRAP1Q96NZ9 151 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 F2RL3Q96RI0 385 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 ADNPQ9H2P0 1102 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 RUBCNLQ9H714 662 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 CXorf21Q9HAI6 301 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 MRPS30Q9NP92 439 aaKnown RBP13.32□□□□□ -0.28
LDB3-204ENST00000372066 A4GALTQ9NPC4 353 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 KRT84Q9NSB2 600 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 KCNK6Q9Y257 313 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 NAALAD2Q9Y3Q0 740 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 CELSR3Q9NYQ7 3312 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 ASXL3Q9C0F0 2248 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PDZK1P1A8MUH7 402 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 SLC1A7O00341 560 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 GCM2O75603 506 aaPredicted RBP13.32□□□□□ -0.28
LDB3-204ENST00000372066 ANXA8P13928 327 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PRKACGP22612 351 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 CMPK1P30085 196 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 DAPP51397 102 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PCBP4P57723 403 aaKnown RBP13.32□□□□□ -0.28
LDB3-204ENST00000372066 CYP4F2P78329 520 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 ZIC1Q15915 447 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 ADPRMQ3LIE5 342 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 OR4C11Q6IEV9 310 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 REEP3Q6NUK4 255 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 GALNT10Q86SR1 603 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 CYP4Z1Q86W10 505 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 TRIM69Q86WT6 500 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 RNF130Q86XS8 419 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 ADGRF3Q8IZF5 1079 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 OR52E1Q8NGJ3 308 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 OR10Q1Q8NGQ4 319 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 NFKBIDQ8NI38 313 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 SPPL2AQ8TCT8 520 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 KLK6Q92876 244 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 MAL2Q969L2 176 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PSD2Q9BQI7 771 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 GABARAPL3Q9BY60 117 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 CCNB1IP1Q9NPC3 277 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 ENOPH1Q9UHY7 261 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 TPRKBQ9Y3C4 175 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 SNX5Q9Y5X3 404 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 PTPRBP23467 1997 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 ITPR1Q14643 2758 aa13.32□□□□□ -0.28
LDB3-204ENST00000372066 KNTC1P50748 2209 aa13.31□□□□□ -0.28
LDB3-204ENST00000372066 A0A0A6YYD5 115 aa13.31□□□□□ -0.28
LDB3-204ENST00000372066 PRSS38A1L453 326 aa13.31□□□□□ -0.28
LDB3-204ENST00000372066 TMEM229AB2RXF0 380 aa13.31□□□□□ -0.28
LDB3-204ENST00000372066 TOR1BO14657 336 aa13.31□□□□□ -0.28
LDB3-204ENST00000372066 PRICKLE3O43900 615 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms