RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ZNF140P52738 457 aaPredicted RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 CAPZA1P52907 286 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 SHQ1Q6PI26 577 aaKnown RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 NAXEQ8NCW5 288 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 ARRDC2Q8TBH0 407 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 HAVCR1Q96D42 359 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 TIMM29Q9BSF4 260 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 NHSL1Q5SYE7 1610 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 PRAMEF2O60811 474 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 C8BP07358 591 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 SCRN3Q0VDG4 424 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 GINS1Q14691 196 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 LCTLQ6UWM7 567 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 ZNF440Q8IYI8 595 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 ALDH16A1Q8IZ83 802 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 NLGN4XQ8N0W4 816 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 ZNF283Q8N7M2 679 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 L3HYPDHQ96EM0 354 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 ERMAPQ96PL5 475 aaPredicted RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 CST11Q9H112 138 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 GFRA2O00451 464 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 HCKP08631 526 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 HTR1AP08908 422 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 TMEM31Q5JXX7 168 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 FIP1L1Q6UN15 594 aaKnown RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 LRRC69Q6ZNQ3 347 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 IQCF2Q8IXL9 164 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 SDR16C5Q8N3Y7 309 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 EID2Q8N6I1 236 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 MFSD2AQ8NA29 543 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 ZUFSPQ96AP4 578 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 CPNE2Q96FN4 548 aaPredicted RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 NAA11Q9BSU3 229 aaPredicted RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 KCNK12Q9HB15 430 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 DKK3Q9UBP4 350 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 LHX3Q9UBR4 397 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 MCATQ8IVS2 390 aaKnown RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 RAB2BQ8WUD1 216 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 PRSS16Q9NQE7 514 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 PTRH2Q9Y3E5 179 aaKnown RBP14.05□□□□□ -0.16
NDC1-201ENST00000371429 PCDHGB2Q9Y5G2 931 aa14.05□□□□□ -0.16
NDC1-201ENST00000371429 RDH16O75452 317 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 CERS1P27544 350 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 ARHGAP19Q14CB8 494 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 KIAA1614Q5VZ46 1190 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 NSMAFQ92636 917 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 SMIM14Q96QK8 99 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 FAM129BQ96TA1 746 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 IGSF5Q9NSI5 407 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 DNAJC27Q9NZQ0 273 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 C5AR2Q9P296 337 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 MALT1Q9UDY8 824 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 H3BSH0 61 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 UGDHO60701 494 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 STARP49675 285 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 YPEL5P62699 121 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 FOXK1P85037 733 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 SLC14A2Q15849 920 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 LRIF1Q5T3J3 769 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 DPH2Q9BQC3 489 aaPredicted RBP14.04□□□□□ -0.16
NDC1-201ENST00000371429 POU2F3Q9UKI9 436 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 FABP12A6NFH5 140 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 SAGE2PA6NJ88 616 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 SOBPA7XYQ1 873 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 SPARCP09486 303 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 LAMP1P11279 417 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 GADD45AP24522 165 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 RORCP51449 518 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 FAM189A2Q15884 450 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 BLOC1S3Q6QNY0 202 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
NDC1-201ENST00000371429 TMEM174Q8WUU8 243 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 HTRA1Q92743 480 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 HS6ST2Q96MM7 605 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 ZNF888P0CJ79 500 aaPredicted RBP14.04□□□□□ -0.16
NDC1-201ENST00000371429 ADAM17P78536 824 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 ZNF33BQ06732 778 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 KANK2Q63ZY3 851 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 USP43Q70EL4 1123 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 ZSWIM9Q86XI8 627 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 CLECL1Q8IZS7 167 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 OR14L1PQ8NHC6 308 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 PMM1Q92871 262 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 NEIL2Q969S2 332 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 APIPQ96GX9 242 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 MSANTD3Q96H12 275 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 MND1Q9BWT6 205 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 TTYH1Q9H313 450 aaPredicted RBP14.04□□□□□ -0.16
NDC1-201ENST00000371429 EHD1Q9H4M9 534 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 ARNT2Q9HBZ2 717 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 TAAR2Q9P1P5 351 aa14.04□□□□□ -0.16
NDC1-201ENST00000371429 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
NDC1-201ENST00000371429 CACNG3O60359 315 aa14.03□□□□□ -0.16
NDC1-201ENST00000371429 KLKB1P03952 638 aa14.03□□□□□ -0.16
NDC1-201ENST00000371429 NR0B1P51843 470 aaKnown RBP14.03□□□□□ -0.16
NDC1-201ENST00000371429 CRYZQ08257 329 aaKnown RBP14.03□□□□□ -0.16
NDC1-201ENST00000371429 SGCDQ92629 289 aa14.03□□□□□ -0.16
NDC1-201ENST00000371429 PTERQ96BW5 349 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms